Information for 7-GAAAAGTAATTTTGTG (Motif 19)

A C T G C G T A C G T A C G T A C G T A A C T G C G A T C G T A C G T A A C G T A G C T A C G T C G A T A C T G C G A T A T C G
Reverse Opposite:
A T G C G C T A A G T C C G T A C G T A C T G A G T C A A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T A G T C
p-value:1e-8
log p-value:-1.886e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.6 +/- 21.3bp
Average Position of motif in Background68.1 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAAAAGTAATTTTGTG
AGAAACGAAAGT-----
 A C G T A C T G C G T A C G T A C G T A C G T A A C T G C G A T C G T A C G T A A C G T A G C T A C G T C G A T A C T G C G A T A T C G
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Lhx3/MA0135.1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAAAAGTAATTTTGTG
GATTAATTAATTT----
 A C G T A C T G C G T A C G T A C G T A C G T A A C T G C G A T C G T A C G T A A C G T A G C T A C G T C G A T A C T G C G A T A T C G
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GAAAAGTAATTTTGTG
-AAAAGTCAA------
 A C T G C G T A C G T A C G T A C G T A A C T G C G A T C G T A C G T A A C G T A G C T A C G T C G A T A C T G C G A T A T C G
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:4
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GAAAAGTAATTTTGTG
----AATAATT-----
 A C T G C G T A C G T A C G T A C G T A A C T G C G A T C G T A C G T A A C G T A G C T A C G T C G A T A C T G C G A T A T C G
A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T A C G T A C G T

PH0108.1_Msx3/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GAAAAGTAATTTTGTG
CAAAACCAATTAATTT
 A C T G C G T A C G T A C G T A C G T A A C T G C G A T C G T A C G T A A C G T A G C T A C G T C G A T A C T G C G A T A T C G
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

PH0028.1_En1/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GAAAAGTAATTTTGTG
GCGAACTAATTAATGC
 A C T G C G T A C G T A C G T A C G T A A C T G C G A T C G T A C G T A A C G T A G C T A C G T C G A T A C T G C G A T A T C G
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GAAAAGTAATTTTGTG
TGGAAAA-----------
 A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G C G A T C G T A C G T A A C G T A G C T A C G T C G A T A C T G C G A T A T C G
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Dlx1/MA0879.1/Jaspar

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GAAAAGTAATTTTGTG
----NNTAATTANN--
 A C T G C G T A C G T A C G T A C G T A A C T G C G A T C G T A C G T A A C G T A G C T A C G T C G A T A C T G C G A T A T C G
A C G T A C G T A C G T A C G T T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:9
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GAAAAGTAATTTTGTG---
-----CTAATATTGCTAAA
 A C T G C G T A C G T A C G T A C G T A A C T G C G A T C G T A C G T A A C G T A G C T A C G T C G A T A C T G C G A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GAAAAGTAATTTTGTG---
-----CTAATATTGCTAAA
 A C T G C G T A C G T A C G T A C G T A A C T G C G A T C G T A C G T A A C G T A G C T A C G T C G A T A C T G C G A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A