Information for 8-TAGTCGTAAT (Motif 16)

A C G T C T G A A C T G A G C T T A G C A C T G A C G T C G T A C G T A C G A T
Reverse Opposite:
C G T A A C G T A C G T C G T A G T A C A C T G C T G A A G T C A G C T C G T A
p-value:1e-8
log p-value:-2.043e+01
Information Content per bp:1.869
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.0 +/- 24.9bp
Average Position of motif in Background73.5 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD12/MA0873.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TAGTCGTAAT--
-AGTCGTAAAAA
 A C G T C T G A A C T G A G C T T A G C A C T G A C G T C G T A C G T A C G A T A C G T A C G T
A C G T T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

PH0065.1_Hoxc10/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TAGTCGTAAT----
TAAAGTCGTAAAACGT
 A C G T A C G T A C G T C T G A A C T G A G C T T A G C A C T G A C G T C G T A C G T A C G A T A C G T A C G T A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TAGTCGTAAT----
TAAAGTCGTAAAATAG
 A C G T A C G T A C G T C T G A A C T G A G C T T A G C A C T G A C G T C G T A C G T A C G A T A C G T A C G T A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

HOXC12/MA0906.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TAGTCGTAAT--
-GGTCGTAAAAA
 A C G T C T G A A C T G A G C T T A G C A C T G A C G T C G T A C G T A C G A T A C G T A C G T
A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

PH0077.1_Hoxd12/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TAGTCGTAAT-----
CAAGGTCGTAAAATCTT
 A C G T A C G T A C G T C T G A A C T G A G C T T A G C A C T G A C G T C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

PH0047.1_Hoxa11/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TAGTCGTAAT----
TAAAGTCGTAAAACAT
 A C G T A C G T A C G T C T G A A C T G A G C T T A G C A C T G A C G T C G T A C G T A C G A T A C G T A C G T A C G T A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TAGTCGTAAT-----
TAAGGTCGTAAAATCCT
 A C G T A C G T A C G T C T G A A C T G A G C T T A G C A C T G A C G T C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

HOXC11/MA0651.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TAGTCGTAAT--
-GGTCGTAAAAT
 A C G T C T G A A C T G A G C T T A G C A C T G A C G T C G T A C G T A C G A T A C G T A C G T
A C G T C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

PB0032.1_IRC900814_1/Jaspar

Match Rank:9
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TAGTCGTAAT-
GNNATTTGTCGTAANN
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A G C T T A G C A C T G A C G T C G T A C G T A C G A T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TAGTCGTAAT--
--GTCGTAAAAA
 A C G T C T G A A C T G A G C T T A G C A C T G A C G T C G T A C G T A C G A T A C G T A C G T
A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A