Information for 5-GAGGGCGGAGCCT (Motif 5)

A C T G C T G A C T A G A C T G A C T G A G T C A C T G A C T G C G T A A C T G G A T C A G T C A C G T
Reverse Opposite:
G T C A A C T G C A T G A G T C A C G T A G T C A G T C A C T G A G T C A G T C A G T C A G C T G T A C
p-value:1e-11
log p-value:-2.734e+01
Information Content per bp:1.898
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.8 +/- 16.2bp
Average Position of motif in Background14.7 +/- 3.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GAGGGCGGAGCCT
RGKGGGCGGAGC--
 A C G T A C T G C T G A C T A G A C T G A C T G A G T C A C T G A C T G C G T A A C T G G A T C A G T C A C G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GAGGGCGGAGCCT
AGGGGGCGGGGCTG
 A C G T A C T G C T G A C T A G A C T G A C T G A G T C A C T G A C T G C G T A A C T G G A T C A G T C A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GAGGGCGGAGCCT
GGGGGCGGGGCC-
 A C T G C T G A C T A G A C T G A C T G A G T C A C T G A C T G C G T A A C T G G A T C A G T C A C G T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:4
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGCGGAGCCT
NNVDGGGYGGGGCYN
 A C G T A C G T A C T G C T G A C T A G A C T G A C T G A G T C A C T G A C T G C G T A A C T G G A T C A G T C A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GAGGGCGGAGCCT
GGGGGCGGGGC--
 A C T G C T G A C T A G A C T G A C T G A G T C A C T G A C T G C G T A A C T G G A T C A G T C A C G T
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.69
Offset:-8
Orientation:forward strand
Alignment:--------GAGGGCGGAGCCT
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A C T A G A C T G A C T G A G T C A C T G A C T G C G T A A C T G G A T C A G T C A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GAGGGCGGAGCCT
GGGNGGGGGCGGGGC--
 A C G T A C G T A C G T A C G T A C T G C T G A C T A G A C T G A C T G A G T C A C T G A C T G C G T A A C T G G A T C A G T C A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GAGGGCGGAGCCT
-GGGGNGGGGC--
 A C T G C T G A C T A G A C T G A C T G A G T C A C T G A C T G C G T A A C T G G A T C A G T C A C G T
A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GAGGGCGGAGCCT
RGKGGGCGKGGC--
 A C G T A C T G C T G A C T A G A C T G A C T G A G T C A C T G A C T G C G T A A C T G G A T C A G T C A C G T
C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:GAGGGCGGAGCCT
-----CGGAGC--
 A C T G C T G A C T A G A C T G A C T G A G T C A C T G A C T G C G T A A C T G G A T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T