Information for 4-AGGCAATATGAGA (Motif 4)

C G T A A C T G A C T G G T A C C G T A C G T A G A C T C T G A A C G T A T C G C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A T G C C G T A A G C T C T G A A C G T A C G T A C T G A G T C A G T C A C G T
p-value:1e-13
log p-value:-3.149e+01
Information Content per bp:1.933
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.5 +/- 34.8bp
Average Position of motif in Background48.1 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AGGCAATATGAGA-
--GWAAYHTGABMC
 C G T A A C T G A C T G G T A C C G T A C G T A G A C T C T G A A C G T A T C G C G T A A C T G C G T A A C G T
A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGGCAATATGAGA-
--GWAAYHTGAKMC
 C G T A A C T G A C T G G T A C C G T A C G T A G A C T C T G A A C G T A T C G C G T A A C T G C G T A A C G T
A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGGCAATATGAGA---
WNAGTCADAVTGAAACTN
 A C G T A C G T C G T A A C T G A C T G G T A C C G T A C G T A G A C T C T G A A C G T A T C G C G T A A C T G C G T A A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGGCAATATGAGA
NACAGGAAAT------
 A C G T A C G T A C G T C G T A A C T G A C T G G T A C C G T A C G T A G A C T C T G A A C G T A T C G C G T A A C T G C G T A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGGCAATATGAGA-
BAGTCATANTGAAAG
 A C G T C G T A A C T G A C T G G T A C C G T A C G T A G A C T C T G A A C G T A T C G C G T A A C T G C G T A A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGGCAATATGAGA
NNTNNCAATATTAG-
 A C G T A C G T C G T A A C T G A C T G G T A C C G T A C G T A G A C T C T G A A C G T A T C G C G T A A C T G C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGGCAATATGAGA
NNTNNCAATATTAG-
 A C G T A C G T C G T A A C T G A C T G G T A C C G T A C G T A G A C T C T G A A C G T A T C G C G T A A C T G C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

Mecom/MA0029.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGGCAATATGAGA
AAGATAAGATAACA
 A C G T C G T A A C T G A C T G G T A C C G T A C G T A G A C T C T G A A C G T A T C G C G T A A C T G C G T A
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

PB0106.1_Arid5a_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGGCAATATGAGA---
CATACAATACGAAATAA
 A C G T C G T A A C T G A C T G G T A C C G T A C G T A G A C T C T G A A C G T A T C G C G T A A C T G C G T A A C G T A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGGCAATATGAGA
NACAGGAAAT------
 A C G T A C G T A C G T C G T A A C T G A C T G G T A C C G T A C G T A G A C T C T G A A C G T A T C G C G T A A C T G C G T A
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T