Information for 18-TGCACACCCTTTC (Motif 25)

G A C T C T A G A G T C G T C A G T A C G T C A A T G C A T G C G A T C C A G T A G C T A G C T A G T C
Reverse Opposite:
A C T G C T G A C T G A G T C A C T A G A T C G A T C G A C G T A C T G C A G T A C T G A G T C C G T A
p-value:1e-8
log p-value:-1.940e+01
Information Content per bp:1.780
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif44.7
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets60.0 +/- 25.1bp
Average Position of motif in Background53.1 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGCACACCCTTTC
GGCCACACCCAN--
 A C G T G A C T C T A G A G T C G T C A G T A C G T C A A T G C A T G C G A T C C A G T A G C T A G C T A G T C
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGCACACCCTTTC
GGCCACACCCA---
 A C G T G A C T C T A G A G T C G T C A G T A C G T C A A T G C A T G C G A T C C A G T A G C T A G C T A G T C
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGCACACCCTTTC
AGCGGCACACACGCAA
 A C G T A C G T A C G T G A C T C T A G A G T C G T C A G T A C G T C A A T G C A T G C G A T C C A G T A G C T A G C T A G T C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGCACACCCTTTC
GCCMCRCCCH---
 G A C T C T A G A G T C G T C A G T A C G T C A A T G C A T G C G A T C C A G T A G C T A G C T A G T C
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCACACCCTTTC
GCCCCACCCA---
 G A C T C T A G A G T C G T C A G T A C G T C A A T G C A T G C G A T C C A G T A G C T A G C T A G T C
T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TGCACACCCTTTC-
ANNTNCCCACCCANNAC
 A C G T A C G T A C G T G A C T C T A G A G T C G T C A G T A C G T C A A T G C A T G C G A T C C A G T A G C T A G C T A G T C A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGCACACCCTTTC
GCCACACCCA---
 G A C T C T A G A G T C G T C A G T A C G T C A A T G C A T G C G A T C C A G T A G C T A G C T A G T C
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TGCACACCCTTTC
NNTTTTCACACCTTNNN
 A C G T A C G T A C G T A C G T G A C T C T A G A G T C G T C A G T A C G T C A A T G C A T G C G A T C C A G T A G C T A G C T A G T C
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

PB0107.1_Ascl2_2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGCACACCCTTTC
CTATCCCCGCCCTATT
 A C G T A C G T A C G T G A C T C T A G A G T C G T C A G T A C G T C A A T G C A T G C G A T C C A G T A G C T A G C T A G T C
A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGCACACCCTTTC
NRGCCCCRCCCHBNN
 A C G T A C G T G A C T C T A G A G T C G T C A G T A C G T C A A T G C A T G C G A T C C A G T A G C T A G C T A G T C
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C