Information for 9-CCCKCCYCMCCAGGVG (Motif 23)

A G T C A T G C A G T C C A T G A G T C A G T C A G C T A G T C G T A C A T G C A G T C T G C A C T A G A T C G T C A G A C T G
Reverse Opposite:
G T A C A G T C A T G C A G T C A C G T C T A G T A C G C A T G C T A G C T G A T C A G A C T G G T A C T C A G A T C G A C T G
p-value:1e-8
log p-value:-1.970e+01
Information Content per bp:1.699
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif56.3
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets58.3 +/- 24.1bp
Average Position of motif in Background42.1 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0101.1_Zic1_1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CCCKCCYCMCCAGGVG--
----CCCCCCCGGGGGNN
 A G T C A T G C A G T C C A T G A G T C A G T C A G C T A G T C G T A C A T G C A G T C T G C A C T A G A T C G T C A G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCCKCCYCMCCAGGVG
GCCCCGCCCCCTCCC---
 A C G T A C G T A G T C A T G C A G T C C A T G A G T C A G T C A G C T A G T C G T A C A T G C A G T C T G C A C T A G A T C G T C A G A C T G
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CCCKCCYCMCCAGGVG--
---NCCCCCCCGGGGGGN
 A G T C A T G C A G T C C A T G A G T C A G T C A G C T A G T C G T A C A T G C A G T C T G C A C T A G A T C G T C A G A C T G A C G T A C G T
A C G T A C G T A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

SP1/MA0079.3/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCCKCCYCMCCAGGVG
GCCCCGCCCCC-------
 A C G T A C G T A G T C A T G C A G T C C A T G A G T C A G T C A G C T A G T C G T A C A T G C A G T C T G C A C T A G A T C G T C A G A C T G
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CCCKCCYCMCCAGGVG--
---ACCCCCCCGGGGGGN
 A G T C A T G C A G T C C A T G A G T C A G T C A G C T A G T C G T A C A T G C A G T C T G C A C T A G A T C G T C A G A C T G A C G T A C G T
A C G T A C G T A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCKCCYCMCCAGGVG
CCCCCGCCCCCGCC----
 A C G T A C G T A G T C A T G C A G T C C A T G A G T C A G T C A G C T A G T C G T A C A T G C A G T C T G C A C T A G A T C G T C A G A C T G
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CCCKCCYCMCCAGGVG--
------TCCCCTGGGGAC
 A G T C A T G C A G T C C A T G A G T C A G T C A G C T A G T C G T A C A T G C A G T C T G C A C T A G A T C G T C A G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CCCKCCYCMCCAGGVG-
-----CACAGCAGGGGG
 A G T C A T G C A G T C C A T G A G T C A G T C A G C T A G T C G T A C A T G C A G T C T G C A C T A G A T C G T C A G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCCKCCYCMCCAGGVG
TGCCTGCGYCMCCTT---
 A C G T A C G T A G T C A T G C A G T C C A T G A G T C A G T C A G C T A G T C G T A C A T G C A G T C T G C A C T A G A T C G T C A G A C T G
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCCKCCYCMCCAGGVG
CCCCTCCCCCAC-----
 A C G T A G T C A T G C A G T C C A T G A G T C A G T C A G C T A G T C G T A C A T G C A G T C T G C A C T A G A T C G T C A G A C T G
T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C A C G T A C G T A C G T A C G T A C G T