Motif 19

Information for 9-TCCCGGGCCT (Motif 19)

Reverse Opposite:

p-value:	1e-8
log p-value:	-2.068e+01
Information Content per bp:	1.839
Number of Target Sequences with motif	30.0
Percentage of Target Sequences with motif	4.14%
Number of Background Sequences with motif	497.1
Percentage of Background Sequences with motif	1.09%
Average Position of motif in Targets	48.6 +/- 26.9bp
Average Position of motif in Background	49.4 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)	-0.8
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:	1
Score:	0.75
Offset:	-3
Orientation:	forward strand
Alignment:	---TCCCGGGCCT- GGGGCCGAGGCCTG

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:	2
Score:	0.69
Offset:	2
Orientation:	reverse strand
Alignment:	TCCCGGGCCT --CNAGGCCT

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:	3
Score:	0.67
Offset:	2
Orientation:	reverse strand
Alignment:	TCCCGGGCCT --CTAGGCCT

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:	4
Score:	0.65
Offset:	-2
Orientation:	reverse strand
Alignment:	--TCCCGGGCCT-- ATGCCCGGGCATGT

POL011.1_XCPE1/Jaspar

Match Rank:	5
Score:	0.61
Offset:	-2
Orientation:	reverse strand
Alignment:	--TCCCGGGCCT GGTCCCGCCC--

E2F4/MA0470.1/Jaspar

Match Rank:	6
Score:	0.59
Offset:	-3
Orientation:	reverse strand
Alignment:	---TCCCGGGCCT NNTTCCCGCCC--

PB0140.1_Irf6_2/Jaspar

Match Rank:	7
Score:	0.59
Offset:	-5
Orientation:	forward strand
Alignment:	-----TCCCGGGCCT ACCACTCTCGGTCAC

POL006.1_BREu/Jaspar

Match Rank:	8
Score:	0.59
Offset:	1
Orientation:	forward strand
Alignment:	TCCCGGGCCT -AGCGCGCC-

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:	9
Score:	0.58
Offset:	0
Orientation:	reverse strand
Alignment:	TCCCGGGCCT----- TCCCAGMCRAGCCCC

E2F6/MA0471.1/Jaspar

Match Rank:	10
Score:	0.57
Offset:	-3
Orientation:	reverse strand
Alignment:	---TCCCGGGCCT NCTTCCCGCCC--