Information for 4-TGAAACATAT (Motif 9)

A C G T A C T G C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C G T A C T G A C G T A C G T A C G T A G T C C G T A
p-value:1e-4
log p-value:-1.100e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets85.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BHLHE23/MA0817.1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:TGAAACATAT----
--AAACATATGTTT
 A C G T A C T G C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

OLIG1/MA0826.1/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:TGAAACATAT---
---AACATATGTT
 A C G T A C T G C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T

Atoh1/MA0461.2/Jaspar

Match Rank:3
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TGAAACATAT---
---AACATATGTT
 A C G T A C T G C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T

OLIG3/MA0827.1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TGAAACATAT---
---ACCATATGTT
 A C G T A C T G C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T

OLIG2/MA0678.1/Jaspar

Match Rank:5
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TGAAACATAT---
---ACCATATGGT
 A C G T A C T G C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T

NEUROG2/MA0669.1/Jaspar

Match Rank:6
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TGAAACATAT---
---AACATATGTC
 A C G T A C T G C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C

Twist2/MA0633.1/Jaspar

Match Rank:7
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:TGAAACATAT---
---NACATATGGN
 A C G T A C T G C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

BHLHE22/MA0818.1/Jaspar

Match Rank:8
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TGAAACATAT---
---ACCATATGTT
 A C G T A C T G C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T

Neurog1/MA0623.1/Jaspar

Match Rank:9
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TGAAACATAT---
---ACCATATGGT
 A C G T A C T G C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGAAACATAT
ACTGAAACCA--
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C G T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T