Information for 2-TCGAATTTTT (Motif 8)

A C G T A G T C A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A C G T A A C G T A C G T A G T C A C T G C G T A
p-value:1e-4
log p-value:-1.100e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ONECUT2/MA0756.1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TCGAATTTTT
ATTATCGATTTTTT
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

ONECUT1/MA0679.1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TCGAATTTTT
ANTATCGATTTTTN
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TCGAATTTTT
NTTATTGATTTTTT
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TCGAATTTTT--
CCTTGCAATTTTTNN
 A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TCGAATTTTT
---AATTATT
 A C G T A G T C A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCGAATTTTT-----
-AAAATTGTTATGAA
 A C G T A G T C A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0136.1_IRC900814_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCGAATTTTT--
TTTTACGACTTTCCAT
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCGAATTTTT-----
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TCGAATTTTT-
----ATTGTTA
 A C G T A G T C A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCGAATTTTT------
TTCAATTGTTCTAAAA
 A C G T A G T C A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A