Information for 25-AGCCAMRAATTTG (Motif 33)

C T G A A C T G G T A C G T A C G C T A T G A C T C A G T C G A T G C A A G C T A C G T G A C T C T A G
Reverse Opposite:
G A T C C G T A G T C A C T G A A C G T A G C T A G T C A C G T C G A T A C T G C A T G T G A C G A C T
p-value:1e-4
log p-value:-9.999e+00
Information Content per bp:1.634
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif642.3
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets60.0 +/- 33.0bp
Average Position of motif in Background47.8 +/- 70.9bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA5/MA0158.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGCCAMRAATTTG
---CACTAATT--
 C T G A A C T G G T A C G T A C G C T A T G A C T C A G T C G A T G C A A G C T A C G T G A C T C T A G
A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGCCAMRAATTTG
TGCCAA-------
 C T G A A C T G G T A C G T A C G C T A T G A C T C A G T C G A T G C A A G C T A C G T G A C T C T A G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGCCAMRAATTTG
AAACCACAGAN---
 A C G T C T G A A C T G G T A C G T A C G C T A T G A C T C A G T C G A T G C A A G C T A C G T G A C T C T A G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGCCAMRAATTTG
CGTGCCAAG------
 A C G T A C G T C T G A A C T G G T A C G T A C G C T A T G A C T C A G T C G A T G C A A G C T A C G T G A C T C T A G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGCCAMRAATTTG
--CCWGGAATGY-
 C T G A A C T G G T A C G T A C G C T A T G A C T C A G T C G A T G C A A G C T A C G T G A C T C T A G
A C G T A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T

PH0033.1_Gbx1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGCCAMRAATTTG----
TGCCACTAATTAGTGTA
 C T G A A C T G G T A C G T A C G C T A T G A C T C A G T C G A T G C A A G C T A C G T G A C T C T A G A C G T A C G T A C G T A C G T
G C A T C T A G A T G C T G A C T C G A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A C G T A C T G A C G T G C T A

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGCCAMRAATTTG
GGCCATAAATCA-
 C T G A A C T G G T A C G T A C G C T A T G A C T C A G T C G A T G C A A G C T A C G T G A C T C T A G
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGCCAMRAATTTG
NWAACCACADNN---
 A C G T A C G T C T G A A C T G G T A C G T A C G C T A T G A C T C A G T C G A T G C A A G C T A C G T G A C T C T A G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

PB0136.1_IRC900814_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGCCAMRAATTTG---
TTTTACGACTTTCCAT
 C T G A A C T G G T A C G T A C G C T A T G A C T C A G T C G A T G C A A G C T A C G T G A C T C T A G A C G T A C G T A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGCCAMRAATTTG
AAACCACANN----
 A C G T C T G A A C T G G T A C G T A C G C T A T G A C T C A G T C G A T G C A A G C T A C G T G A C T C T A G
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T