Information for 11-AGCCCTTGAGGAGGCC (Motif 30)

C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C T G A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C G T
p-value:1e-4
log p-value:-1.100e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGCCCTTGAGGAGGCC
TGACCTTGAN------
 C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C T G A C T G A G T C A G T C
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGCCCTTGAGGAGGCC
TGACCTTGAV------
 C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C T G A C T G A G T C A G T C
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGCCCTTGAGGAGGCC
TGCCCTGAGGGCA---
 C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C T G A C T G A G T C A G T C
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AGCCCTTGAGGAGGCC
-TCCCCTGGGGAC---
 C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C T G A C T G A G T C A G T C
A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.51
Offset:11
Orientation:forward strand
Alignment:AGCCCTTGAGGAGGCC---
-----------AGGCCTNG
 C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGCCCTTGAGGAGGCC
NATGACCTTGA-------
 A C G T A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C T G A C T G A G T C A G T C
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AGCCCTTGAGGAGGCC
BNTGDCCTTG--------
 A C G T A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C T G A C T G A G T C A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:AGCCCTTGAGGAGGCC-
---------CTAGGCCT
 C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C T G A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AGCCCTTGAGGAGGCC
-CCACTTGAA------
 C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C T G A C T G A G T C A G T C
A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----AGCCCTTGAGGAGGCC
NNNNATGACCTTGANTN----
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C T G A C T G A G T C A G T C
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T A C G T A C G T A C G T