Information for 2-SKGKSCGSCTCSGSCC (Motif 3)

A T G C A C G T A C T G A C T G A T C G A G T C A C T G A T G C A G T C A C G T A G T C A T C G A C T G A T C G A G T C A T G C
Reverse Opposite:
A T C G A C T G A T G C A G T C T A C G A C T G C G T A A C T G A T C G A G T C A C T G A T G C G T A C A G T C G T C A A T C G
p-value:1e-7
log p-value:-1.832e+01
Information Content per bp:1.829
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif10.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.5 +/- 10.5bp
Average Position of motif in Background68.2 +/- 51.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:SKGKSCGSCTCSGSCC---
-------GCTCCGCCCMCY
 A T G C A C G T A C T G A C T G A T C G A G T C A C T G A T G C A G T C A C G T A G T C A T C G A C T G A T C G A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:forward strand
Alignment:SKGKSCGSCTCSGSCC
-----CGCCTCAGGCA
 A T G C A C G T A C T G A C T G A T C G A G T C A C T G A T G C A G T C A C G T A G T C A T C G A C T G A T C G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:SKGKSCGSCTCSGSCC--
------GGCCCCGCCCCC
 A T G C A C G T A C T G A C T G A T C G A G T C A C T G A T G C A G T C A C G T A G T C A T C G A C T G A T C G A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:SKGKSCGSCTCSGSCC
-----NGCCTNAGGCN
 A T G C A C G T A C T G A C T G A T C G A G T C A C T G A T G C A G T C A C G T A G T C A T C G A C T G A T C G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:SKGKSCGSCTCSGSCC---
-----NAGCCCCGCCCCCN
 A T G C A C G T A C T G A C T G A T C G A G T C A C T G A T G C A G T C A C G T A G T C A T C G A C T G A T C G A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:SKGKSCGSCTCSGSCC
-----TGCCTGAGGCN
 A T G C A C G T A C T G A C T G A T C G A G T C A C T G A T G C A G T C A C G T A G T C A T C G A C T G A T C G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:SKGKSCGSCTCSGSCC--
---NTNGCCTCAGGCNNN
 A T G C A C G T A C T G A C T G A T C G A G T C A C T G A T G C A G T C A C G T A G T C A T C G A C T G A T C G A G T C A T G C A C G T A C G T
A C G T A C G T A C G T G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:SKGKSCGSCTCSGSCC-
-------GCTCGGSCTC
 A T G C A C G T A C T G A C T G A T C G A G T C A C T G A T G C A G T C A C G T A G T C A T C G A C T G A T C G A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:SKGKSCGSCTCSGSCC--
------SCCTSAGGSCAW
 A T G C A C G T A C T G A C T G A T C G A G T C A C T G A T G C A G T C A C G T A G T C A T C G A C T G A T C G A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.53
Offset:7
Orientation:forward strand
Alignment:SKGKSCGSCTCSGSCC
-------GCTCCG---
 A T G C A C G T A C T G A C T G A T C G A G T C A C T G A T G C A G T C A C G T A G T C A T C G A C T G A T C G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T