Information for 23-CAACGCCCTGCCA (Motif 28)

A G T C C G T A C G T A A G T C A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C T G A G T C A C T G A C G T A C G T A C T G
p-value:1e-4
log p-value:-1.100e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf12/MA0742.1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAACGCCCTGCCA
GACCACGCCCTTATT
 A C G T A C G T A G T C C G T A C G T A A G T C A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C C G T A
C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAACGCCCTGCCA-----
-TACGCCCCGCCACTCTG
 A G T C C G T A C G T A A G T C A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CAACGCCCTGCCA
NRGCCCCRCCCHBNN-
 A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C C G T A
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C A C G T

EGR4/MA0733.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAACGCCCTGCCA---
TTACGCCCACGCATTT
 A G T C C G T A C G T A A G T C A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAACGCCCTGCCA
GGCCACRCCCMK---
 A C G T A C G T A G T C C G T A C G T A A G T C A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C C G T A
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAACGCCCTGCCA--
CTACGCCCACGCACT
 A G T C C G T A C G T A A G T C A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C C G T A A C G T A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.57
Offset:7
Orientation:forward strand
Alignment:CAACGCCCTGCCA--
-------TTGCCAAG
 A G T C C G T A C G T A A G T C A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

Klf4/MA0039.2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAACGCCCTGCCA
GCCCCACCCA----
 A C G T A G T C C G T A C G T A A G T C A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C C G T A
T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CAACGCCCTGCCA--
------CGTGCCAAG
 A G T C C G T A C G T A A G T C A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CAACGCCCTGCCA-
--------TGCCAA
 A G T C C G T A C G T A A G T C A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A