Information for 21-TGTCCCCAGCATT (Motif 26)

A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G A G T C A C G T A C T G A C T G A C T G A C T G C G T A A G T C C G T A
p-value:1e-4
log p-value:-1.100e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGTCCCCAGCATT
--TCCCCA-----
 A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGTCCCCAGCATT
--TGCCCAGNHW-
 A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C G T A C G T
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TGTCCCCAGCATT
TGTCGTGACCCCTTAAT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TGTCCCCAGCATT
NNNNTTGACCCCTNNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCCCAGCATT
CTGTTCCTGG----
 A C G T A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C G T A C G T
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGTCCCCAGCATT
SCTGTCARCACC---
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C G T A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TGTCCCCAGCATT
NNANTTGACCCCTNNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TGTCCCCAGCATT
NNCNTGACCCCGCTCT-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGTCCCCAGCATT
TGACCTYA-----
 A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C G T A C G T
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGTCCCCAGCATT
-ATGCCCACC---
 A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C G T A C G T
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T