Information for 18-ATTTGATGGGCCC (Motif 24)

C G T A A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A G T C A G T C A G T C C G T A A C G T A G T C C G T A C G T A C G T A A C G T
p-value:1e-4
log p-value:-1.100e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0056.1_Hoxa9/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGATGGGCCC
ANTAATTTTATGGCCGN
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G A G T C A G T C A G T C
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

PH0064.1_Hoxb9/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATTTGATGGGCCC
NGANTTTTATGGCTCN
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G A G T C A G T C A G T C
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATTTGATGGGCCC
-GTTAATGGCC--
 C G T A A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G A G T C A G T C A G T C
A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATTTGATGGGCCC
-TTTAATTGCN--
 C G T A A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G A G T C A G T C A G T C
A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATTTGATGGGCCC
NTTTTATTGG---
 C G T A A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G A G T C A G T C A G T C
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATTTGATGGGCCC
-TTTAAT------
 C G T A A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G A G T C A G T C A G T C
A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATTTGATGGGCCC
-TTTTATTRGN--
 C G T A A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G A G T C A G T C A G T C
A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATTTGATGGGCCC
NTTTTATTGG---
 C G T A A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G A G T C A G T C A G T C
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATTTGATGGGCCC
-TTTTATKRGG--
 C G T A A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G A G T C A G T C A G T C
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGATGGGCCC
NNNNNATTGATGNGTGN
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G A G T C A G T C A G T C
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A