Information for 11-TGAATGAACGCGG (Motif 18)

A C G T A C T G C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C T G A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C G T A C G T A G T C C G T A
p-value:1e-4
log p-value:-1.100e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----TGAATGAACGCGG
ACTATGAATGAATGAT-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C T G A G T C A C T G A C T G
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------TGAATGAACGCGG
NNTNTCATGAATGT------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C T G A G T C A C T G A C T G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGAATGAACGCGG--
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C T G A G T C A C T G A C T G A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PH0173.1_Uncx/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TGAATGAACGCGG
CATAATTAATTAACGCG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C T G A G T C A C T G A C T G
T G A C C T G A G C A T C T G A T G C A A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A G T C T A C G T A G C A C T G A C G T

PH0069.1_Hoxc4/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TGAATGAACGCGG
NNTNNTTAATTAATNCG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C T G A G T C A C T G A C T G
C A G T C G T A A C G T C G A T T C A G G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A G A C T C A G T A G T C A C T G A C G T

Alx4/MA0853.1/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGAATGAACGCGG
GNNNATTAATTAATGCG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C T G A G T C A C T G A C T G
T C A G A T C G C A G T C G T A T C G A G A C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A G A C T C T A G A T G C A C T G A C G T

PH0002.1_Alx4/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGAATGAACGCGG
GNNNATTAATTAATGCG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C T G A G T C A C T G A C T G
T C A G A T C G C A G T C G T A T C G A G A C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A G A C T C T A G A T G C A C T G A C G T

PH0059.1_Hoxb4/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TGAATGAACGCGG
GNTNATTAATTAACNNG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C T G A G T C A C T G A C T G
C T A G C A T G A C G T C G T A T C G A G A C T G A C T G T C A C G T A C G A T A C G T C T G A C T G A A G T C C A T G A G T C A T C G A C G T

PH0051.1_Hoxa4/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TGAATGAACGCGG
GATTATTAATTAACTTG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C T G A G T C A C T G A C T G
C T A G C T G A G A C T G A C T T C G A G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G T C C A G T A G C T A C T G A C G T

PH0128.1_Otp/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TGAATGAACGCGG
CGTAATTAATTAATTGG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C T G A G T C A C T G A C T G
T G A C T C A G G A C T C G T A T C G A G A C T G A C T T C G A C T G A A G C T A C G T C T G A C T G A A G C T C A G T C A T G A C T G A C G T