Information for 10-CGCTGAGCCCTTG (Motif 17)

A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C C G T A A C T G A G T C A C T G
p-value:1e-4
log p-value:-1.100e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGCTGAGCCCTTG--
NNNNTTGACCCCTNNNN
 A C G T A C G T A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CGCTGAGCCCTTG--
-----TGACCTTGAN
 A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CGCTGAGCCCTTG--
TGTCGTGACCCCTTAAT
 A C G T A C G T A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0200.1_Zfp187_2/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CGCTGAGCCCTTG-------
----GAGCCCTTGTCCCTAA
 A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGCTGAGCCCTTG
HTGCTGAGTCAT--
 A C G T A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G
G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGCTGAGCCCTTG--
NNANTTGACCCCTNNNN
 A C G T A C G T A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CGCTGAGCCCTTG
---BNTGDCCTTG
 A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G
A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CGCTGAGCCCTTG
CCTGCTGAGH-----
 A C G T A C G T A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CGCTGAGCCCTTG--
-----TGACCTTGAV
 A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGCTGAGCCCTTG
--ATAATCCC---
 A G T C A C T G A G T C A C G T A C T G C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C T G
A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T