Information for 9-TCTGCTTAGCAGG (Motif 16)

A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A G T C A C G T C G T A C G T A A C T G A G T C C G T A A C T G C G T A
p-value:1e-4
log p-value:-1.100e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets21.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0022.1_Gata5_1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCTTAGCAGG---
NTNTTCTTATCAGTNTN
 A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TCTGCTTAGCAGG---
----CACAGCAGGGGG
 A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCTGCTTAGCAGG---
-CCACACAGCAGGAGA
 A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TCTGCTTAGCAGG
---DCTCAGCAGG
 A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G
A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCTGCTTAGCAGG---
-CCACACAGCAGGAGA
 A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TCTGCTTAGCAGG-----
---DCHCAGCAGGRGGCC
 A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCTGCTTAGCAGG---
-GAGCACAGCAGGACA
 A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TCTGCTTAGCAGG
AATTTGCTGAC----
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCTGCTTAGCAGG
--NCCTTATCTG-
 A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G
A C G T A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T

PH0032.1_Evx2/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TCTGCTTAGCAGG-
ANCGCTAATTAGCGGTN
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G A C G T
C G T A T G A C T G A C T A C G T A G C A G C T T G C A C G T A A C G T A C G T C T G A T A C G A G T C C A T G C T A G A C G T T C A G