Information for 3-CAGCCACCCCGCC (Motif 10)

A G T C C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C T G A C T G A C T G A C T G A C G T A C T G A C T G A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.100e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets9.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CAGCCACCCCGCC------
--TACGCCCCGCCACTCTG
 A G T C C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

KLF16/MA0741.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CAGCCACCCCGCC
--GCCACGCCCCC
 A G T C C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C T G A G T C A G T C
A C G T A C G T T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C

PB0039.1_Klf7_1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CAGCCACCCCGCC-----
--TCGACCCCGCCCCTAT
 A G T C C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

PB0107.1_Ascl2_2/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAGCCACCCCGCC-----
--CTATCCCCGCCCTATT
 A G T C C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CAGCCACCCCGCC----
---NAGCCCCGCCCCCN
 A G T C C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAGCCACCCCGCC-
--GCCACRCCCACY
 A G T C C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C T G A G T C A G T C A C G T
A C G T A C G T T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

SP8/MA0747.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAGCCACCCCGCC-
--GCCACGCCCACT
 A G T C C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C T G A G T C A G T C A C G T
A C G T A C G T T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T

SP4/MA0685.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAGCCACCCCGCC---
TAAGCCACGCCCCCTTT
 A C G T A G T C C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

SP3/MA0746.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAGCCACCCCGCC
--GCCACGCCCCC
 A G T C C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C T G A G T C A G T C
A C G T A C G T T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C

PB0151.1_Myf6_2/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CAGCCACCCCGCC
AGCAACAGCCGCACC---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C T G A G T C A G T C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T A C G T