Information for 1-CGCRCCASWGGCS (Motif 1)

A T G C A C T G A G T C C T A G A G T C A G T C C G T A A T G C C G A T A C T G A C T G A G T C A T C G
Reverse Opposite:
A T G C A C T G A G T C A G T C C G T A A T C G C G A T A C T G A C T G A G T C A C T G A G T C A T C G
p-value:1e-9
log p-value:-2.292e+01
Information Content per bp:1.870
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.5 +/- 25.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGCRCCASWGGCS
--CGCCTCAGGCA
 A T G C A C T G A G T C C T A G A G T C A G T C C G T A A T G C C G A T A C T G A C T G A G T C A T C G
A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGCRCCASWGGCS
--AGCCTCAGGCA
 A T G C A C T G A G T C C T A G A G T C A G T C C G T A A T G C C G A T A C T G A C T G A G T C A T C G
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CGCRCCASWGGCS
--AGCCTCAGGCA
 A T G C A C T G A G T C C T A G A G T C A G T C C G T A A T G C C G A T A C T G A C T G A G T C A T C G
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGCRCCASWGGCS--
NTNGCCTCAGGCNNN
 A T G C A C T G A G T C C T A G A G T C A G T C C G T A A T G C C G A T A C T G A C T G A G T C A T C G A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGCRCCASWGGCS--
ANTGCCTGAGGCAAN
 A T G C A C T G A G T C C T A G A G T C A G T C C G T A A T G C C G A T A C T G A C T G A G T C A T C G A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CGCRCCASWGGCS
AGCTCGGCGCCAAAAGC-
 A C G T A C G T A C G T A C G T A C G T A T G C A C T G A G T C C T A G A G T C A G T C C G T A A T G C C G A T A C T G A C T G A G T C A T C G
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGCRCCASWGGCS
AGCGCGCC-------
 A C G T A C G T A T G C A C T G A G T C C T A G A G T C A G T C C G T A A T G C C G A T A C T G A C T G A G T C A T C G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CGCRCCASWGGCS--
---SCCTSAGGSCAW
 A T G C A C T G A G T C C T A G A G T C A G T C C G T A A T G C C G A T A C T G A C T G A G T C A T C G A C G T A C G T
A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGCRCCASWGGCS--
-TCACCTCTGGGCAG
 A T G C A C T G A G T C C T A G A G T C A G T C C G T A A T G C C G A T A C T G A C T G A G T C A T C G A C G T A C G T
A C G T G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CGCRCCASWGGCS
CCTTCGGCGCCAAAAGG-
 A C G T A C G T A C G T A C G T A C G T A T G C A C T G A G T C C T A G A G T C A G T C C G T A A T G C C G A T A C T G A C T G A G T C A T C G
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T