Information for 2-GCCCACAGGACCCCAC (Motif 4)

A C T G A T G C A T G C A G T C C G T A A G T C C G T A A C T G C T A G C T G A A T G C A T G C A G T C A G T C C T G A A T G C
Reverse Opposite:
A T C G G A C T A C T G A C T G A T C G A T C G A G C T A G T C A G T C A C G T A C T G C G A T A C T G A T C G A T C G A G T C
p-value:1e-9
log p-value:-2.190e+01
Information Content per bp:1.809
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif6.56%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.0 +/- 24.0bp
Average Position of motif in Background65.0 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCCCACAGGACCCCAC
---CACAGN-------
A C T G A T G C A T G C A G T C C G T A A G T C C G T A A C T G C T A G C T G A A T G C A T G C A G T C A G T C C T G A A T G C
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCCCACAGGACCCCAC
ATGCCCTGAGGC------
A C G T A C G T A C T G A T G C A T G C A G T C C G T A A G T C C G T A A C T G C T A G C T G A A T G C A T G C A G T C A G T C C T G A A T G C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCCCACAGGACCCCAC
AAACCACAGAN------
A C G T A C T G A T G C A T G C A G T C C G T A A G T C C G T A A C T G C T A G C T G A A T G C A T G C A G T C A G T C C T G A A T G C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCCCACAGGACCCCAC
WTGSCCTSAGGS------
A C G T A C G T A C T G A T G C A T G C A G T C C G T A A G T C C G T A A C T G C T A G C T G A A T G C A T G C A G T C A G T C C T G A A T G C
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GCCCACAGGACCCCAC
------TGGGGCCCAC
A C T G A T G C A T G C A G T C C G T A A G T C C G T A A C T G C T A G C T G A A T G C A T G C A G T C A G T C C T G A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCCACAGGACCCCAC
TGWCCTCARNTGACC--
A C G T A C T G A T G C A T G C A G T C C G T A A G T C C G T A A C T G C T A G C T G A A T G C A T G C A G T C A G T C C T G A A T G C
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCCACAGGACCCCAC
TGCCCTNAGGGCA----
A C G T A C T G A T G C A T G C A G T C C G T A A G T C C G T A A C T G C T A G C T G A A T G C A T G C A G T C A G T C C T G A A T G C
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCCACAGGACCCCAC
TGCCCNNAGGGCA----
A C G T A C T G A T G C A T G C A G T C C G T A A G T C C G T A A C T G C T A G C T G A A T G C A T G C A G T C A G T C C T G A A T G C
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCCCACAGGACCCCAC
NTGCCCANNGGTNA----
A C G T A C G T A C T G A T G C A T G C A G T C C G T A A G T C C G T A A C T G C T A G C T G A A T G C A T G C A G T C A G T C C T G A A T G C
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCCCACAGGACCCCAC
TGCCCTNAGGGCA----
A C G T A C T G A T G C A T G C A G T C C G T A A G T C C G T A A C T G C T A G C T G A A T G C A T G C A G T C A G T C C T G A A T G C
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T