Information for 2-CTGACAAACTTTG (Motif 4)

G T A C C G A T A C T G T C G A A G T C C G T A G T C A G T C A A T G C A G C T A G C T A C G T A C T G
Reverse Opposite:
G T A C C G T A C T G A C T G A A T C G A C G T A C G T A C G T A C T G A G C T A G T C C G T A A C T G
p-value:1e-11
log p-value:-2.613e+01
Information Content per bp:1.804
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets74.3 +/- 11.9bp
Average Position of motif in Background51.3 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTGACAAACTTTG
RHTGWCAR------
 A C G T G T A C C G A T A C T G T C G A A G T C C G T A G T C A G T C A A T G C A G C T A G C T A C G T A C T G
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTGACAAACTTTG
GCTGTCAA------
 A C G T G T A C C G A T A C T G T C G A A G T C C G T A G T C A G T C A A T G C A G C T A G C T A C G T A C T G
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------CTGACAAACTTTG
NNNCAGCTGTCAATATN--
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G A T A C T G T C G A A G T C C G T A G T C A G T C A A T G C A G C T A G C T A C G T A C T G
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTGACAAACTTTG
ARNTGACA-------
 A C G T A C G T G T A C C G A T A C T G T C G A A G T C C G T A G T C A G T C A A T G C A G C T A G C T A C G T A C T G
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGACAAACTTTG
TTGCCAAG-----
 G T A C C G A T A C T G T C G A A G T C C G T A G T C A G T C A A T G C A G C T A G C T A C G T A C T G
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGACAAACTTTG
CCTGTCAA------
 A C G T G T A C C G A T A C T G T C G A A G T C C G T A G T C A G T C A A T G C A G C T A G C T A C G T A C T G
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CTGACAAACTTTG
----CAAGCTT--
 G T A C C G A T A C T G T C G A A G T C C G T A G T C A G T C A A T G C A G C T A G C T A C G T A C T G
A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGACAAACTTTG---
NNNNCAACCTTCGNGA
 G T A C C G A T A C T G T C G A A G T C C G T A G T C A G T C A A T G C A G C T A G C T A C G T A C T G A C G T A C G T A C G T
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGACAAACTTTG
VGCTGWCAVB-----
 A C G T A C G T G T A C C G A T A C T G T C G A A G T C C G T A G T C A G T C A A T G C A G C T A G C T A C G T A C T G
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CTGACAAACTTTG
AAAGACCTGTCAATCC---
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G A T A C T G T C G A A G T C C G T A G T C A G T C A A T G C A G C T A G C T A C G T A C T G
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C A C G T A C G T A C G T