Information for 6-TTTTCAAAAG (Motif 18)

G C A T A C G T A G C T C A G T A T G C C G T A C T G A G T C A C G T A C T A G
Reverse Opposite:
A G T C C G A T A C G T A G C T A C G T T A C G G T C A C T G A G T C A C G T A
p-value:1e-7
log p-value:-1.758e+01
Information Content per bp:1.832
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.17%
Number of Background Sequences with motif209.2
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets44.8 +/- 27.0bp
Average Position of motif in Background47.2 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TTTTCAAAAG
CGGTTTCAAA--
 A C G T A C G T G C A T A C G T A G C T C A G T A T G C C G T A C T G A G T C A C G T A C T A G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTTTCAAAAG
NATTCAAAT-
 G C A T A C G T A G C T C A G T A T G C C G T A C T G A G T C A C G T A C T A G
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTTTCAAAAG---
CAATTGCAAAAATAT
 A C G T A C G T G C A T A C G T A G C T C A G T A T G C C G T A C T G A G T C A C G T A C T A G A C G T A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTTTCAAAAG
ACATCAAAGG
 G C A T A C G T A G C T C A G T A T G C C G T A C T G A G T C A C G T A C T A G
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

CEBPA/MA0102.3/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTTTCAAAAG-
ATTGCACAATA
 G C A T A C G T A G C T C A G T A T G C C G T A C T G A G T C A C G T A C T A G A C G T
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTTTCAAAAG
TTTTCCA---
 G C A T A C G T A G C T C A G T A T G C C G T A C T G A G T C A C G T A C T A G
C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTTTCAAAAG
ATTTTCCATT-
 A C G T G C A T A C G T A G C T C A G T A T G C C G T A C T G A G T C A C G T A C T A G
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTTTCAAAAG
ACWTCAAAGG
 G C A T A C G T A G C T C A G T A T G C C G T A C T G A G T C A C G T A C T A G
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTTTCAAAAG----
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T G C A T A C G T A G C T C A G T A T G C C G T A C T G A G T C A C G T A C T A G A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTTTCAAAAG----
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T G C A T A C G T A G C T C A G T A T G C C G T A C T G A G T C A C G T A C T A G A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A