Information for 5-GCCCAATGAGCAG (Motif 5)

C T A G A G T C G A T C A T G C C T G A T G C A A C G T A T C G C G T A C T A G T A G C C T G A A C T G
Reverse Opposite:
T A G C A G C T A T C G A G T C C G A T A T G C T C G A A C G T A G C T A T C G C T A G A C T G A G T C
p-value:1e-7
log p-value:-1.818e+01
Information Content per bp:1.722
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif162.5
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets60.7 +/- 27.7bp
Average Position of motif in Background51.9 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCCCAATGAGCAG---
TGGACCAATCAGCACTCT
 A C G T A C G T C T A G A G T C G A T C A T G C C T G A T G C A A C G T A T C G C G T A C T A G T A G C C T G A A C T G A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCCCAATGAGCAG
AAATGGACCAATCAG---
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A T C A T G C C T G A T G C A A C G T A T C G C G T A C T A G T A G C C T G A A C T G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCCCAATGAGCAG
AGCCAATCGG---
 C T A G A G T C G A T C A T G C C T G A T G C A A C G T A T C G C G T A C T A G T A G C C T G A A C T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T A C G T

MAFG/MA0659.1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GCCCAATGAGCAG---
AATNTGCTGACTCAGCANTTT
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A T C A T G C C T G A T G C A A C G T A T C G C G T A C T A G T A G C C T G A A C T G A C G T A C G T A C G T
C G T A C G T A G C A T C G T A G A C T T A C G G T A C G A C T C A T G G T C A T A G C C G A T G T A C C T G A C A T G A T G C C T G A G C T A C G A T G C A T G C A T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCCAATGAGCAG
GCTGASTCAGCA-
 C T A G A G T C G A T C A T G C C T G A T G C A A C G T A T C G C G T A C T A G T A G C C T G A A C T G
T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A A C G T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCCCAATGAGCAG----
WNTGCTGASTCAGCANWTTY
 A C G T A C G T A C G T C T A G A G T C G A T C A T G C C T G A T G C A A C G T A T C G C G T A C T A G T A G C C T G A A C T G A C G T A C G T A C G T A C G T
C G T A G A C T C G A T A T C G G T A C G C A T C A T G C G T A T A C G G C A T G T A C C G T A C A T G A T G C G C T A C T A G G C A T G C A T G C A T G A C T

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCCCAATGAGCAG--
CGACCCAATCAACGGTG
 A C G T A C G T C T A G A G T C G A T C A T G C C T G A T G C A A C G T A T C G C G T A C T A G T A G C C T G A A C T G A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GCCCAATGAGCAG
GGGTGTGCCCAAAAGG---
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A T C A T G C C T G A T G C A A C G T A T C G C G T A C T A G T A G C C T G A A C T G
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCCCAATGAGCAG
ACTAGCCAATCA----
 A C G T A C G T A C G T C T A G A G T C G A T C A T G C C T G A T G C A A C G T A T C G C G T A C T A G T A G C C T G A A C T G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCCAATGAGCAG-----
GCTGAGTCAGCAATTTTT
 C T A G A G T C G A T C A T G C C T G A T G C A A C G T A T C G C G T A C T A G T A G C C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T