Information for 1-VYKCCGATTGGCY (Motif 1)

T A G C G A T C C A G T T A G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T
Reverse Opposite:
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C C T A G A T C G G T C A C T A G A T C G
p-value:1e-43
log p-value:-9.943e+01
Information Content per bp:1.668
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif26.52%
Number of Background Sequences with motif1150.6
Percentage of Background Sequences with motif2.48%
Average Position of motif in Targets51.5 +/- 26.2bp
Average Position of motif in Background48.5 +/- 35.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.96
Offset:3
Orientation:reverse strand
Alignment:VYKCCGATTGGCY
---CCGATTGGCT
 T A G C G A T C C A G T T A G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T
A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.91
Offset:4
Orientation:reverse strand
Alignment:VYKCCGATTGGCY---
----TGATTGGCTANN
 T A G C G A T C C A G T T A G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.91
Offset:3
Orientation:reverse strand
Alignment:VYKCCGATTGGCY-----
---CTGATTGGTCNATTT
 T A G C G A T C C A G T T A G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.86
Offset:-3
Orientation:forward strand
Alignment:---VYKCCGATTGGCY--
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T T A G C G A T C C A G T T A G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.75
Offset:7
Orientation:forward strand
Alignment:VYKCCGATTGGCY
-------TTGGCA
 T A G C G A T C C A G T T A G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:VYKCCGATTGGCY
---TTGATTGN--
 T A G C G A T C C A G T T A G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T
A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.71
Offset:6
Orientation:reverse strand
Alignment:VYKCCGATTGGCY--
------NTTGGCANN
 T A G C G A T C C A G T T A G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

SOX9/MA0077.1/Jaspar

Match Rank:8
Score:0.68
Offset:4
Orientation:forward strand
Alignment:VYKCCGATTGGCY
----CCATTGTTC
 T A G C G A T C C A G T T A G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T
A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:VYKCCGATTGGCY
-CNGTGATTTN--
 T A G C G A T C C A G T T A G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T
A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.67
Offset:3
Orientation:forward strand
Alignment:VYKCCGATTGGCY
---CTCATTGTC-
 T A G C G A T C C A G T T A G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T
A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T