Information for 1-AGCTGTGGBAGGG (Motif 1)

C G T A A C T G A G T C A C G T A C T G A C G T C T A G A C T G A C G T C G T A A C T G A T C G A C T G
Reverse Opposite:
A G T C A T G C A G T C C G A T T A C G A G T C A G T C C G T A A G T C C G T A A C T G A G T C C G A T
p-value:1e-12
log p-value:-2.924e+01
Information Content per bp:1.850
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif17.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.5 +/- 32.6bp
Average Position of motif in Background49.6 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGCTGTGGBAGGG
-GCTGTG------
 C G T A A C T G A G T C A C G T A C T G A C G T C T A G A C T G A C G T C G T A A C T G A T C G A C T G
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGCTGTGGBAGGG
-GCTGTGGTTT--
 C G T A A C T G A G T C A C G T A C T G A C G T C T A G A C T G A C G T C G T A A C T G A T C G A C T G
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGCTGTGGBAGGG
NNHTGTGGTTWN-
 C G T A A C T G A G T C A C G T A C T G A C G T C T A G A C T G A C G T C G T A A C T G A T C G A C T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGCTGTGGBAGGG
CAGCTGTT------
 A C G T C G T A A C T G A G T C A C G T A C T G A C G T C T A G A C T G A C G T C G T A A C T G A T C G A C T G
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGCTGTGGBAGGG
GTCTGTGGTTT--
 C G T A A C T G A G T C A C G T A C T G A C G T C T A G A C T G A C G T C G T A A C T G A T C G A C T G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AGCTGTGGBAGGG
BAACAGCTGT-------
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G A C G T C T A G A C T G A C G T C G T A A C T G A T C G A C T G
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGCTGTGGBAGGG
NAHCAGCTGD-------
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G A C G T C T A G A C T G A C G T C G T A A C T G A T C G A C T G
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGCTGTGGBAGGG
--CTGTGGTTTN-
 C G T A A C T G A G T C A C G T A C T G A C G T C T A G A C T G A C G T C G T A A C T G A T C G A C T G
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGCTGTGGBAGGG
CCAGCTGTTN-----
 A C G T A C G T C G T A A C T G A G T C A C G T A C T G A C G T C T A G A C T G A C G T C G T A A C T G A T C G A C T G
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AGCTGTGGBAGGG
NNGCAGCTGTT------
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G A C G T C T A G A C T G A C G T C G T A A C T G A T C G A C T G
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T