Information for 4-TCGCGGAGGGCCCGCC (Motif 6)

A C G T A G T C A C T G A G T C A C T G A C T G C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C T G A C T G A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C T G A G T C A C T G C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 0.0bp
Average Position of motif in Background35.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLIS2/MA0736.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCGCGGAGGGCCCGCC
CTTCGCGGGGGGTC----
 A C G T A C G T A C G T A G T C A C T G A G T C A C T G A C T G C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A G T C A G T C
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCGCGGAGGGCCCGCC
GCCGCGCAGTGCGT---
 A C G T A C G T A G T C A C T G A G T C A C T G A C T G C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A G T C A G T C
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TCGCGGAGGGCCCGCC---
-------GGCCCCGCCCCC
 A C G T A G T C A C T G A G T C A C T G A C T G C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TCGCGGAGGGCCCGCC-
-------GGTCCCGCCC
 A C G T A G T C A C T G A G T C A C T G A C T G C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.55
Offset:8
Orientation:forward strand
Alignment:TCGCGGAGGGCCCGCC-------
--------GCCCCGCCCCCTCCC
 A C G T A G T C A C T G A G T C A C T G A C T G C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCGCGGAGGGCCCGCC-
-NNNGGGGCGCCCCCNN
 A C G T A G T C A C T G A G T C A C T G A C T G C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A G T C A G T C A C G T
A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0009.1_E2F3_1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TCGCGGAGGGCCCGCC--
---ATAAGGGCGCGCGAT
 A C G T A G T C A C T G A G T C A C T G A C T G C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TCGCGGAGGGCCCGCC----
------NAGCCCCGCCCCCN
 A C G T A G T C A C T G A G T C A C T G A C T G C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TCGCGGAGGGCCCGCC------
-----TACGCCCCGCCACTCTG
 A C G T A G T C A C T G A G T C A C T G A C T G C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TCGCGGAGGGCCCGCC--
---ATAAAGGCGCGCGAT
 A C G T A G T C A C T G A G T C A C T G A C T G C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T