Information for 1-CCAACGCTGA (Motif 3)

T G A C A T G C T C G A C G T A G T A C T C A G A G T C G A C T A T C G G T C A
Reverse Opposite:
C A G T A T G C C T G A A C T G A G T C C A T G G C A T A G C T T A C G A C T G
p-value:1e-11
log p-value:-2.638e+01
Information Content per bp:1.685
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif6.81%
Number of Background Sequences with motif1073.6
Percentage of Background Sequences with motif2.35%
Average Position of motif in Targets48.1 +/- 27.5bp
Average Position of motif in Background51.3 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCAACGCTGA----
----TGCTGACTCA
 T G A C A T G C T C G A C G T A G T A C T C A G A G T C G A C T A T C G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

EGR2/MA0472.2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCAACGCTGA
ACGCCCACGCA--
 A C G T A C G T A C G T T G A C A T G C T C G A C G T A G T A C T C A G A G T C G A C T A T C G G T C A
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCAACGCTGA--
AAAATGCTGACT
 T G A C A T G C T C G A C G T A G T A C T C A G A G T C G A C T A T C G G T C A A C G T A C G T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCAACGCTGA
----NGCTN-
 T G A C A T G C T C G A C G T A G T A C T C A G A G T C G A C T A T C G G T C A
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CCAACGCTGA-
-----GCTGTG
 T G A C A T G C T C G A C G T A G T A C T C A G A G T C G A C T A T C G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CCAACGCTGA
YCCGCCCACGCN--
 A C G T A C G T A C G T A C G T T G A C A T G C T C G A C G T A G T A C T C A G A G T C G A C T A T C G G T C A
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCAACGCTGA-
AATTTGCTGAC
 T G A C A T G C T C G A C G T A G T A C T C A G A G T C G A C T A T C G G T C A A C G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCAACGCTGA
CRCCCACGCA--
 A C G T A C G T T G A C A T G C T C G A C G T A G T A C T C A G A G T C G A C T A T C G G T C A
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCAACGCTGA
--NNNANTGA
 T G A C A T G C T C G A C G T A G T A C T C A G A G T C G A C T A T C G G T C A
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCAACGCTGA--
--CCTGCTGAGH
 T G A C A T G C T C G A C G T A G T A C T C A G A G T C G A C T A T C G G T C A A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A