Information for 2-TCGCTGCGGCCAG (Motif 5)

C G A T A T G C A C T G A G T C A C G T A C T G A G T C C T A G A C T G A G T C A G T C C G T A A T C G
Reverse Opposite:
A T G C C G A T C T A G A C T G A G T C G A T C A C T G A G T C G T C A C T A G A G T C T A C G C G T A
p-value:1e-7
log p-value:-1.684e+01
Information Content per bp:1.787
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif16.13%
Number of Background Sequences with motif142.9
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets45.4 +/- 25.8bp
Average Position of motif in Background53.9 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCGCTGCGGCCAG
GGGGCCGAGGCCTG
 A C G T C G A T A T G C A C T G A G T C A C G T A C T G A G T C C T A G A C T G A G T C A G T C C G T A A T C G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCGCTGCGGCCAG
-CGCAGCTGCG--
 C G A T A T G C A C T G A G T C A C G T A C T G A G T C C T A G A C T G A G T C A G T C C G T A A T C G
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCGCTGCGGCCAG
TGGGTGTGGC---
 C G A T A T G C A C T G A G T C A C G T A C T G A G T C C T A G A C T G A G T C A G T C C G T A A T C G
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TCGCTGCGGCCAG
---TTGCGGTTT-
 C G A T A T G C A C T G A G T C A C G T A C T G A G T C C T A G A C T G A G T C A G T C C G T A A T C G
A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TCGCTGCGGCCAG
NTGGGTGTGGCC--
 A C G T C G A T A T G C A C T G A G T C A C G T A C T G A G T C C T A G A C T G A G T C A G T C C G T A A T C G
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TCGCTGCGGCCAG
MKGGGYGTGGCC--
 A C G T C G A T A T G C A C T G A G T C A C G T A C T G A G T C C T A G A C T G A G T C A G T C C G T A A T C G
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TCGCTGCGGCCAG
TGGGTGTGGCN--
 C G A T A T G C A C T G A G T C A C G T A C T G A G T C C T A G A C T G A G T C A G T C C G T A A T C G
C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TCGCTGCGGCCAG
-AGCAGCTGCTNN
 C G A T A T G C A C T G A G T C A C G T A C T G A G T C C T A G A C T G A G T C A G T C C G T A A T C G
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---TCGCTGCGGCCAG
NNVDGGGYGGGGCYN-
 A C G T A C G T A C G T C G A T A T G C A C T G A G T C A C G T A C T G A G T C C T A G A C T G A G T C A G T C C G T A A T C G
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TCGCTGCGGCCAG
--TTTGCGGTTT-
 C G A T A T G C A C T G A G T C A C G T A C T G A G T C C T A G A C T G A G T C A G T C C G T A A T C G
A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T