Information for 4-AGGCCTAGAT (Motif 12)

C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A C G T C G T A A C T G A C T G A G T C A G T C A C G T
p-value:1e-2
log p-value:-6.593e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.23%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets10.0 +/- 0.0bp
Average Position of motif in Background79.7 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.84
Offset:0
Orientation:forward strand
Alignment:AGGCCTAGAT
AGGCCTAG--
 C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C T G C G T A A C G T
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.83
Offset:0
Orientation:forward strand
Alignment:AGGCCTAGAT
AGGCCTNG--
 C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C T G C G T A A C G T
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCTAGAT---
CAGGCCNNGGCCNN
 A C G T C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGGCCTAGAT
TGACCTARTT
 C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C T G C G T A A C G T
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AGGCCTAGAT---
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGGCCTAGAT-----
NGNTCTAGAACCNGV
 C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCTAGAT---
TTGACCTANTTATN
 A C G T C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGGCCTAGAT
TGACCTTGAN
 C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C T G C G T A A C G T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGGCCTAGAT
GAGSCCGAGC-
 A C G T C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C T G C G T A A C G T
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGCCTAGAT-
-TGTCTAGACG
 C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C T G C G T A A C G T A C G T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G