Information for 2-WSCSCTGTCCYCGCAM (Motif 6)

C G T A A T G C A G T C A T C G A G T C A C G T A C T G A C G T A G T C A G T C A G T C T A G C A C T G A T G C T C G A G T C A
Reverse Opposite:
C A G T A C G T A T C G A G T C A T C G C T A G C T A G A C T G C G T A A G T C C G T A A C T G A T G C A C T G A T C G C G A T
p-value:1e-10
log p-value:-2.483e+01
Information Content per bp:1.785
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif15.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets40.0 +/- 20.4bp
Average Position of motif in Background43.4 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:WSCSCTGTCCYCGCAM
----CTGTTCCTGG--
 C G T A A T G C A G T C A T C G A G T C A C G T A C T G A C G T A G T C A G T C A G T C T A G C A C T G A T G C T C G A G T C A
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:WSCSCTGTCCYCGCAM
---GCTGTG-------
 C G T A A T G C A G T C A T C G A G T C A C G T A C T G A C G T A G T C A G T C A G T C T A G C A C T G A T G C T C G A G T C A
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:WSCSCTGTCCYCGCAM
---GCTGTCAA-----
 C G T A A T G C A G T C A T C G A G T C A C G T A C T G A C G T A G T C A G T C A G T C T A G C A C T G A T G C T C G A G T C A
A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:WSCSCTGTCCYCGCAM
---CCTGTCAA-----
 C G T A A T G C A G T C A T C G A G T C A C G T A C T G A C G T A G T C A G T C A G T C T A G C A C T G A T G C T C G A G T C A
A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:WSCSCTGTCCYCGCAM
----NTGTCAN-----
 C G T A A T G C A G T C A T C G A G T C A C G T A C T G A C G T A G T C A G T C A G T C T A G C A C T G A T G C T C G A G T C A
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:WSCSCTGTCCYCGCAM
---SCTGTCARCACC-
 C G T A A T G C A G T C A T C G A G T C A C G T A C T G A C G T A G T C A G T C A G T C T A G C A C T G A T G C T C G A G T C A
A C G T A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:WSCSCTGTCCYCGCAM
-----TGACCTYA---
 C G T A A T G C A G T C A T C G A G T C A C G T A C T G A C G T A G T C A G T C A G T C T A G C A C T G A T G C T C G A G T C A
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--WSCSCTGTCCYCGCAM
TGACCTCTGACCCCN---
 A C G T A C G T C G T A A T G C A G T C A T C G A G T C A C G T A C T G A C G T A G T C A G T C A G T C T A G C A C T G A T G C T C G A G T C A
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--WSCSCTGTCCYCGCAM
GAGCCCTTGTCCCTAA--
 A C G T A C G T C G T A A T G C A G T C A T C G A G T C A C G T A C T G A C G T A G T C A G T C A G T C T A G C A C T G A T G C T C G A G T C A
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:WSCSCTGTCCYCGCAM-
-NNNNTGACCCGGCGCG
 C G T A A T G C A G T C A T C G A G T C A C G T A C T G A C G T A G T C A G T C A G T C T A G C A C T G A T G C T C G A G T C A A C G T
A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G