Information for 7-GGATGCATGK (Motif 20)

A T C G C T A G G T C A A G C T C T A G A G T C C G T A A C G T A C T G A C G T
Reverse Opposite:
G T C A A G T C C G T A A C G T A C T G A G T C C T G A A C G T A G T C A T G C
p-value:1e-7
log p-value:-1.646e+01
Information Content per bp:1.818
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.2 +/- 33.0bp
Average Position of motif in Background60.6 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0083.1_Irx3_1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGATGCATGK------
AAAATACATGTAATACT
 A C G T A T C G C T A G G T C A A G C T C T A G A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0082.1_Irx2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGATGCATGK------
TAAATACATGTAAAATT
 A C G T A T C G C T A G G T C A A G C T C T A G A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0084.1_Irx3_2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGATGCATGK------
AATATACATGTAATATA
 A C G T A T C G C T A G G T C A A G C T C T A G A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0086.1_Irx5/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGATGCATGK------
AATATACATGTAAAATT
 A C G T A T C G C T A G G T C A A G C T C T A G A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PH0085.1_Irx4/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGATGCATGK------
AATATACATGTAAAACA
 A C G T A T C G C T A G G T C A A G C T C T A G A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

Myc/MA0147.2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGATGCATGK
AAGCACATGG
 A T C G C T A G G T C A A G C T C T A G A G T C C G T A A C G T A C T G A C G T
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

PH0087.1_Irx6/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGATGCATGK------
AAAATACATGTAAAAAT
 A C G T A T C G C T A G G T C A A G C T C T A G A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGATGCATGK
---TGCGTG-
 A T C G C T A G G T C A A G C T C T A G A G T C C G T A A C G T A C T G A C G T
A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGATGCATGK--
-AAGGCAAGTGT
 A T C G C T A G G T C A A G C T C T A G A G T C C G T A A C G T A C T G A C G T A C G T A C G T
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGATGCATGK--
--ATGMATATDC
 A T C G C T A G G T C A A G C T C T A G A G T C C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C