Information for 4-CCCRGAMAGK (Motif 11)

G A T C T A G C G T A C T C A G A T C G T G C A G T A C T G C A A T C G A C T G
Reverse Opposite:
T G A C T A G C A C G T A C T G A C G T T A G C A G T C C A T G A T C G C T A G
p-value:1e-9
log p-value:-2.239e+01
Information Content per bp:1.493
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.10%
Number of Background Sequences with motif329.6
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets57.0 +/- 24.1bp
Average Position of motif in Background49.7 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:CCCRGAMAGK
----CACAGN
 G A T C T A G C G T A C T C A G A T C G T G C A G T A C T G C A A T C G A C T G
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCCRGAMAGK
-CCAGACAG-
 G A T C T A G C G T A C T C A G A T C G T G C A G T A C T G C A A T C G A C T G
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCCRGAMAGK---
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T G A T C T A G C G T A C T C A G A T C G T G C A G T A C T G C A A T C G A C T G A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CCCRGAMAGK-----
-----VCAGGTRDRY
 G A T C T A G C G T A C T C A G A T C G T G C A G T A C T G C A A T C G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCCRGAMAGK-
-CCAGACRSVB
 G A T C T A G C G T A C T C A G A T C G T G C A G T A C T G C A A T C G A C T G A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

INSM1/MA0155.1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CCCRGAMAGK
CGCCCCCTGACA--
 A C G T A C G T A C G T A C G T G A T C T A G C G T A C T C A G A T C G T G C A G T A C T G C A A T C G A C T G
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCCRGAMAGK
--TTGACAGC
 G A T C T A G C G T A C T C A G A T C G T G C A G T A C T G C A A T C G A C T G
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCCRGAMAGK
GGTGYTGACAGS
 A C G T A C G T G A T C T A G C G T A C T C A G A T C G T G C A G T A C T G C A A T C G A C T G
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCCRGAMAGK----
----AACAGGAAGT
 G A T C T A G C G T A C T C A G A T C G T G C A G T A C T G C A A T C G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CCCRGAMAGK----
----GACAGGTGTN
 G A T C T A G C G T A C T C A G A T C G T G C A G T A C T G C A A T C G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A