Information for 3-CCCTCCYCTCGGTCAC (Motif 5)

A G T C G A T C G T A C A C G T A T G C A G T C A G C T A T G C A G C T A T G C A C T G A T C G A C G T A G T C G T C A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A A T G C T A G C T A C G C T G A A T C G T C A G A C T G A T C G G T C A A C T G C A T G A C T G
p-value:1e-8
log p-value:-1.961e+01
Information Content per bp:1.691
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif2.48%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.4 +/- 21.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.56
Offset:10
Orientation:forward strand
Alignment:CCCTCCYCTCGGTCAC--
----------AGTCACGC
 A G T C G A T C G T A C A C G T A T G C A G T C A G C T A T G C A G C T A T G C A C T G A T C G A C G T A G T C G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

FOSL1/MA0477.1/Jaspar

Match Rank:2
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CCCTCCYCTCGGTCAC-
------NATGAGTCACC
 A G T C G A T C G T A C A C G T A T G C A G T C A G C T A T G C A G C T A T G C A C T G A T C G A C G T A G T C G T C A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CCCTCCYCTCGGTCAC---
---CGCGCCGGGTCACGTA
 A G T C G A T C G T A C A C G T A T G C A G T C A G C T A T G C A G C T A T G C A C T G A T C G A C G T A G T C G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

USF1/MA0093.2/Jaspar

Match Rank:4
Score:0.53
Offset:10
Orientation:reverse strand
Alignment:CCCTCCYCTCGGTCAC-----
----------GGTCACGTGGC
 A G T C G A T C G T A C A C G T A T G C A G T C A G C T A T G C A G C T A T G C A C T G A T C G A C G T A G T C G T C A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CCCTCCYCTCGGTCAC
----CCCCTCCCCCAC
 A G T C G A T C G T A C A C G T A T G C A G T C A G C T A T G C A G C T A T G C A C T G A T C G A C G T A G T C G T C A A G T C
A C G T A C G T A C G T A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.52
Offset:11
Orientation:reverse strand
Alignment:CCCTCCYCTCGGTCAC-----
-----------GTCACATGAY
 A G T C G A T C G T A C A C G T A T G C A G T C A G C T A T G C A G C T A T G C A C T G A T C G A C G T A G T C G T C A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

Mitf/MA0620.1/Jaspar

Match Rank:7
Score:0.52
Offset:10
Orientation:forward strand
Alignment:CCCTCCYCTCGGTCAC----
----------GGTCACGTGG
 A G T C G A T C G T A C A C G T A T G C A G T C A G C T A T G C A G C T A T G C A C T G A T C G A C G T A G T C G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

USF2/MA0526.1/Jaspar

Match Rank:8
Score:0.52
Offset:10
Orientation:reverse strand
Alignment:CCCTCCYCTCGGTCAC-----
----------GGTCACATGAC
 A G T C G A T C G T A C A C G T A T G C A G T C A G C T A T G C A G C T A T G C A C T G A T C G A C G T A G T C G T C A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

JUNB/MA0490.1/Jaspar

Match Rank:9
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CCCTCCYCTCGGTCAC--
-------ATGAGTCATCN
 A G T C G A T C G T A C A C G T A T G C A G T C A G C T A T G C A G C T A T G C A C T G A T C G A C G T A G T C G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C

SP2/MA0516.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCCTCCYCTCGGTCAC
GCCCCGCCCCCTCCC---
 A C G T A C G T A G T C G A T C G T A C A C G T A T G C A G T C A G C T A T G C A G C T A T G C A C T G A T C G A C G T A G T C G T C A A G T C
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T A C G T A C G T