Information for 9-TTAGTTATAGTGA (Motif 14)

A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T C T G A C T A G A C G T A C T G C T G A
Reverse Opposite:
A G C T A G T C C G T A A G T C A G C T C G T A A C G T C G T A C G T A A G T C A C G T C G T A C G T A
p-value:1e-5
log p-value:-1.257e+01
Information Content per bp:1.945
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 25.8bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTAGTTATAGTGA
NNAATTAGTCACGGT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T C T G A C T A G A C G T A C T G C T G A
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTAGTTATAGTGA
ACTAGTTAAC----
 A C G T A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T C T G A C T A G A C G T A C T G C T G A
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T A C G T A C G T

PH0023.1_Dlx4/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTAGTTATAGTGA
GTCGGTAATTATNGNGN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T C T G A C T A G A C G T A C T G C T G A
C A T G C G A T A T G C C A T G A C T G G A C T C G T A C G T A A C G T G C A T C T G A G A C T G T C A A C T G A G T C C A T G T G A C

MEF2D/MA0773.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTAGTTATAGTGA
TCTATTTATAGN--
 A C G T A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T C T G A C T A G A C G T A C T G C T G A
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTAGTTATAGTGA---
-BAGTCATANTGAAAG
 A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T C T G A C T A G A C G T A C T G C T G A A C G T A C G T A C G T
A C G T A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

MEF2B/MA0660.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTAGTTATAGTGA
GCTATTTATAGC--
 A C G T A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T C T G A C T A G A C G T A C T G C T G A
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TTAGTTATAGTGA
GAAAACTAGTTAACATC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T C T G A C T A G A C G T A C T G C T G A
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTAGTTATAGTGA
TCTATTTTTAGA--
 A C G T A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T C T G A C T A G A C G T A C T G C T G A
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T A C G T

PH0011.1_Alx1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TTAGTTATAGTGA
NNNAATTAATTAANGNG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T C T G A C T A G A C G T A C T G C T G A
A C T G G A T C G A T C T C G A T C G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A G A C T C A T G A G T C T C A G A C G T

PH0069.1_Hoxc4/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TTAGTTATAGTGA
NNTNNTTAATTAATNCG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T C T G A C T A G A C G T A C T G C T G A
C A G T C G T A A C G T C G A T T C A G G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A G A C T C A G T A G T C A C T G A C G T