Information for 1-GSRWCACGTGACC (Motif 1)

A T C G A T C G C T A G C G A T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C G T A C
Reverse Opposite:
A C T G A C T G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C T A G C A T G C
p-value:1e-10
log p-value:-2.499e+01
Information Content per bp:1.802
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif4.96%
Number of Background Sequences with motif18.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets56.7 +/- 19.6bp
Average Position of motif in Background41.1 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BHLHE41/MA0636.1/Jaspar

Match Rank:1
Score:0.88
Offset:2
Orientation:forward strand
Alignment:GSRWCACGTGACC
--GTCACGTGAC-
 A T C G A T C G C T A G C G A T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C G T A C
A C G T A C G T T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.88
Offset:3
Orientation:reverse strand
Alignment:GSRWCACGTGACC
---TCACGTGACC
 A T C G A T C G C T A G C G A T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C G T A C
A C G T A C G T A C G T A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C

TFEB/MA0692.1/Jaspar

Match Rank:3
Score:0.88
Offset:2
Orientation:forward strand
Alignment:GSRWCACGTGACC
--ATCACGTGAC-
 A T C G A T C G C T A G C G A T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C G T A C
A C G T A C G T T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:4
Score:0.87
Offset:3
Orientation:reverse strand
Alignment:GSRWCACGTGACC--
---TCACGTGACCGG
 A T C G A T C G C T A G C G A T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

TFE3/MA0831.1/Jaspar

Match Rank:5
Score:0.87
Offset:2
Orientation:forward strand
Alignment:GSRWCACGTGACC
--ATCACGTGAC-
 A T C G A T C G C T A G C G A T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C G T A C
A C G T A C G T T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T

USF1/MA0093.2/Jaspar

Match Rank:6
Score:0.86
Offset:2
Orientation:forward strand
Alignment:GSRWCACGTGACC
--GCCACGTGACC
 A T C G A T C G C T A G C G A T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C G T A C
A C G T A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:7
Score:0.86
Offset:2
Orientation:forward strand
Alignment:GSRWCACGTGACC-
--GTCACGTGACYV
 A T C G A T C G C T A G C G A T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C G T A C A C G T
A C G T A C G T T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.86
Offset:4
Orientation:reverse strand
Alignment:GSRWCACGTGACC
----CACGTGDC-
 A T C G A T C G C T A G C G A T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C G T A C
A C G T A C G T A C G T A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:9
Score:0.86
Offset:2
Orientation:forward strand
Alignment:GSRWCACGTGACC
--ATCACGTGAC-
 A T C G A T C G C T A G C G A T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C G T A C
A C G T A C G T T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C A C G T

Arntl/MA0603.1/Jaspar

Match Rank:10
Score:0.86
Offset:3
Orientation:reverse strand
Alignment:GSRWCACGTGACC
---NCACGTGACN
 A T C G A T C G C T A G C G A T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C G T A C
A C G T A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C