Information for 2-TGGACTTTGC (Motif 2)

G A C T C T A G T C A G T G C A T A G C G C A T G A C T A C G T C A T G T G A C
Reverse Opposite:
A C T G G T A C T G C A C T G A C G T A A T C G A C G T A G T C G A T C C T G A
p-value:1e-15
log p-value:-3.684e+01
Information Content per bp:1.656
Number of Target Sequences with motif71.0
Percentage of Target Sequences with motif8.36%
Number of Background Sequences with motif1293.3
Percentage of Background Sequences with motif2.67%
Average Position of motif in Targets52.5 +/- 27.4bp
Average Position of motif in Background49.8 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.85
Offset:-4
Orientation:reverse strand
Alignment:----TGGACTTTGC--
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T G A C T C T A G T C A G T G C A T A G C G C A T G A C T A C G T C A T G T G A C A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGC------
TGGACTTTGNNCTNTG
 G A C T C T A G T C A G T G C A T A G C G C A T G A C T A C G T C A T G T G A C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGC-----
TGGACTTTGNNCTCN
 G A C T C T A G T C A G T G C A T A G C G C A T G A C T A C G T C A T G T G A C A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--TGGACTTTGC----
ATTGGACTTTGACCCC
 A C G T A C G T G A C T C T A G T C A G T G C A T A G C G C A T G A C T A C G T C A T G T G A C A C G T A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TGGACTTTGC
CTGACCTTTG-
 A C G T G A C T C T A G T C A G T G C A T A G C G C A T G A C T A C G T C A T G T G A C
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGC----
TGACCTTTGCCCTA
 G A C T C T A G T C A G T G C A T A G C G C A T G A C T A C G T C A T G T G A C A C G T A C G T A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGGACTTTGC----
TGACCTTTGCCCCA
 G A C T C T A G T C A G T G C A T A G C G C A T G A C T A C G T C A T G T G A C A C G T A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGGACTTTGC
GGGAATTTCC
 G A C T C T A G T C A G T G C A T A G C G C A T G A C T A C G T C A T G T G A C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGGACTTTGC--
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A C G T G A C T C T A G T C A G T G C A T A G C G C A T G A C T A C G T C A T G T G A C A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGC-----
TGACCTTTGCCCTAN
 G A C T C T A G T C A G T G C A T A G C G C A T G A C T A C G T C A T G T G A C A C G T A C G T A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C