Information for 2-CAAACANAAACACAAA (Motif 3)

T G A C C G T A G T C A C G T A A G T C T G C A A T C G C G T A C G T A C G T A G T A C C T G A A T G C C G T A C G T A C T G A
Reverse Opposite:
A G C T A C G T A C G T A T C G A G C T A C T G A C G T A C G T A C G T A T C G A C G T C T A G G C A T A C G T A C G T A C T G
p-value:1e-8
log p-value:-1.896e+01
Information Content per bp:1.762
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif11.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.2 +/- 25.9bp
Average Position of motif in Background45.2 +/- 43.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1/MA0481.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CAAACANAAACACAAA
CAAAAGTAAACAAAG-
 T G A C C G T A G T C A C G T A A G T C T G C A A T C G C G T A C G T A C G T A G T A C C T G A A T G C C G T A C G T A C T G A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:CAAACANAAACACAAA--
--------AAAACAAAGG
 T G A C C G T A G T C A C G T A A G T C T G C A A T C G C G T A C G T A C G T A G T A C C T G A A T G C C G T A C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAAACANAAACACAAA--
--AAAGTAAACAAAAATT
 T G A C C G T A G T C A C G T A A G T C T G C A A T C G C G T A C G T A C G T A G T A C C T G A A T G C C G T A C G T A C T G A A C G T A C G T
A C G T A C G T G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

RUNX3/MA0684.1/Jaspar

Match Rank:4
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CAAACANAAACACAAA
------AAACCGCAAA
 T G A C C G T A G T C A C G T A A G T C T G C A A T C G C G T A C G T A C G T A G T A C C T G A A T G C C G T A C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

IRF1/MA0050.2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CAAACANAAACACAAA------
-AAANNGAAAGTGAAAGTAAAN
 T G A C C G T A G T C A C G T A A G T C T G C A A T C G C G T A C G T A C G T A G T A C C T G A A T G C C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CAAACANAAACACAAA
------AAACCACANN
 T G A C C G T A G T C A C G T A A G T C T G C A A T C G C G T A C G T A C G T A G T A C C T G A A T G C C G T A C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

PB0123.1_Foxl1_2/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAAACANAAACACAAA-
-ATATCAAAACAAAACA
 T G A C C G T A G T C A C G T A A G T C T G C A A T C G C G T A C G T A C G T A G T A C C T G A A T G C C G T A C G T A C T G A A C G T
A C G T G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

FOXF2/MA0030.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAAACANAAACACAAA
CAAACGTAAACAAT--
 T G A C C G T A G T C A C G T A A G T C T G C A A T C G C G T A C G T A C G T A G T A C C T G A A T G C C G T A C G T A C T G A
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAAACANAAACACAAA-
AAAATGTAAACAAACAG
 T G A C C G T A G T C A C G T A A G T C T G C A A T C G C G T A C G T A C G T A G T A C C T G A A T G C C G T A C G T A C T G A A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAAACANAAACACAAA-
AAAATGTAAACAAACAG
 T G A C C G T A G T C A C G T A A G T C T G C A A T C G C G T A C G T A C G T A G T A C C T G A A T G C C G T A C G T A C T G A A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G