p-value: | 1e-5 |
log p-value: | -1.334e+01 |
Information Content per bp: | 1.925 |
Number of Target Sequences with motif | 2.0 |
Percentage of Target Sequences with motif | 2.78% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 30.5 +/- 24.9bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 2.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 1 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGATCTAACTCCCT --TGACCTARTT---- |
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PH0103.1_Meox1/Jaspar
Match Rank: | 2 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCTGATCTAACTCCCT- -CTGAGGTAATTACCNC |
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PH0045.1_Hoxa1/Jaspar
Match Rank: | 3 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCTGATCTAACTCCCT- -CTGAGCTAATTACCGT |
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RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 4 |
Score: | 0.52 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCTGATCTAACTCCCT -TTGACCTANTTATN- |
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Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer
Match Rank: | 5 |
Score: | 0.52 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCTGATCTAACTCCCT -ATGATGCAAT----- |
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GATA3/MA0037.2/Jaspar
Match Rank: | 6 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCTGATCTAACTCCCT TCTTATCT-------- |
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Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer
Match Rank: | 7 |
Score: | 0.51 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCTGATCTAACTCCCT -MTGATGCAAT----- |
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PH0081.1_Pdx1/Jaspar
Match Rank: | 8 |
Score: | 0.51 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCTGATCTAACTCCCT- -NTGNGCTAATTACCNN |
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Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer
Match Rank: | 9 |
Score: | 0.51 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCTGATCTAACTCCCT NCCTTATCTG------- |
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Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer
Match Rank: | 10 |
Score: | 0.51 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCTGATCTAACTCCCT YCTTATCTBN------ |
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