p-value: | 1e-5 |
log p-value: | -1.334e+01 |
Information Content per bp: | 1.940 |
Number of Target Sequences with motif | 2.0 |
Percentage of Target Sequences with motif | 2.78% |
Number of Background Sequences with motif | 0.5 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 41.5 +/- 22.1bp |
Average Position of motif in Background | 39.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 2.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 1 |
Score: | 0.74 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTAGGTAGT TGACCTARTT--- |
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RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 2 |
Score: | 0.73 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGACCTAGGTAGT TTGACCTANTTATN |
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RORA/MA0071.1/Jaspar
Match Rank: | 3 |
Score: | 0.71 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTAGGTAGT TGACCTTGAT--- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 4 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTAGGTAGT TGACCT------- |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 5 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGACCTAGGTAGT NTGACCTTGA---- |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 6 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGACCTAGGTAGT CTGACCTTTG---- |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 7 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTAGGTAGT TGACCTYA----- |
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Esrrg/MA0643.1/Jaspar
Match Rank: | 8 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGACCTAGGTAGT ATGACCTTGA---- |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 9 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGACCTAGGTAGT GTGACCTT------ |
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ESRRB/MA0141.3/Jaspar
Match Rank: | 10 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGACCTAGGTAGT NATGACCTTGA---- |
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