Information for 9-AGCTCCGTCC (Motif 9)

C G T A A C T G A G T C A C G T A G T C G T A C A C T G A C G T A T G C A G T C
Reverse Opposite:
A C T G A T C G C G T A A G T C C A T G A C T G C G T A A C T G G T A C A C G T
p-value:1e-8
log p-value:-2.065e+01
Information Content per bp:1.912
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif33.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets47.7 +/- 23.3bp
Average Position of motif in Background53.9 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AGCTCCGTCC
-GCTCCG---
 C G T A A C T G A G T C A C G T A G T C G T A C A C T G A C G T A T G C A G T C
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGCTCCGTCC---
-GCTCCGCCCMCY
 C G T A A C T G A G T C A C G T A G T C G T A C A C T G A C G T A T G C A G T C A C G T A C G T A C G T
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGCTCCGTCC--
GGCCCCGCCCCC
 C G T A A C T G A G T C A C G T A G T C G T A C A C T G A C G T A T G C A G T C A C G T A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCCGTCC---
NAGCCCCGCCCCCN
 A C G T C G T A A C T G A G T C A C G T A G T C G T A C A C T G A C G T A T G C A G T C A C G T A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCCGTCC-
CAGCTGTTTCCT
 A C G T C G T A A C T G A G T C A C G T A G T C G T A C A C T G A C G T A T G C A G T C A C G T
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCTCCGTCC----
NRGCCCCRCCCHBNN
 A C G T C G T A A C T G A G T C A C G T A G T C G T A C A C T G A C G T A T G C A G T C A C G T A C G T A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

HINFP/MA0131.2/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGCTCCGTCC----
--CAACGTCCGCGG
 C G T A A C T G A G T C A C G T A G T C G T A C A C T G A C G T A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGCTCCGTCC--
-GCCCCGCCCCC
 C G T A A C T G A G T C A C G T A G T C G T A C A C T G A C G T A T G C A G T C A C G T A C G T
A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGCTCCGTCC
CGCAGCTGCG---
 A C G T A C G T A C G T C G T A A C T G A G T C A C G T A G T C G T A C A C T G A C G T A T G C A G T C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGCTCCGTCC
NGCTN-----
 C G T A A C T G A G T C A C G T A G T C G T A C A C T G A C G T A T G C A G T C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T