Information for 10-GCCCCCTAGCTGC (Motif 7)

A T C G A T G C A G T C G A T C A G T C A G T C A G C T T C G A A T C G A T G C C G A T A T C G A T G C
Reverse Opposite:
T A C G T A G C G C T A T A C G T A G C A G C T T C G A T C A G T C A G C T A G T C A G T A C G T A G C
p-value:1e-9
log p-value:-2.132e+01
Information Content per bp:1.463
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.2 +/- 20.6bp
Average Position of motif in Background23.9 +/- 4.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC3/MA0697.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCCCCCTAGCTGC--
GACCCCCCGCTGCGC
 A T C G A T G C A G T C G A T C A G T C A G T C A G C T T C G A A T C G A T G C C G A T A T C G A T G C A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCCCCCTAGCTGC-
GACCCCCCGCTGTG
 A T C G A T G C A G T C G A T C A G T C A G T C A G C T T C G A A T C G A T G C C G A T A T C G A T G C A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------GCCCCCTAGCTGC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A G T C G A T C A G T C A G T C A G C T T C G A A T C G A T G C C G A T A T C G A T G C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

INSM1/MA0155.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCCTAGCTGC
CGCCCCCTGACA--
 A C G T A T C G A T G C A G T C G A T C A G T C A G T C A G C T T C G A A T C G A T G C C G A T A T C G A T G C
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCCCCTAGCTGC--
GACCCCCCGCTGTGC
 A T C G A T G C A G T C G A T C A G T C A G T C A G C T T C G A A T C G A T G C C G A T A T C G A T G C A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GCCCCCTAGCTGC
GGTCCCGCCCCCTTCTC--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A G T C G A T C A G T C A G T C A G C T T C G A A T C G A T G C C G A T A T C G A T G C
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCCCCTAGCTGC--
GGCCYCCTGCTGDGH
 A T C G A T G C A G T C G A T C A G T C A G T C A G C T T C G A A T C G A T G C C G A T A T C G A T G C A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCCCCCTAGCTGC--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A T C G A T G C A G T C G A T C A G T C A G T C A G C T T C G A A T C G A T G C C G A T A T C G A T G C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCCCCCTAGCTGC-
----CGCAGCTGCG
 A T C G A T G C A G T C G A T C A G T C A G T C A G C T T C G A A T C G A T G C C G A T A T C G A T G C A C G T
A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCCCCCTAGCTGC--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A T C G A T G C A G T C G A T C A G T C A G T C A G C T T C G A A T C G A T G C C G A T A T C G A T G C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A