Information for 11-AAATTTCACA (Motif 11)

C T G A G T C A G C T A C A G T A G C T C G A T A G T C G C T A G T A C G C T A
Reverse Opposite:
C A G T A C T G C A G T A C T G G C T A T C G A G T C A C G A T C A G T G A C T
p-value:1e-7
log p-value:-1.799e+01
Information Content per bp:1.815
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.79%
Number of Background Sequences with motif345.7
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets47.5 +/- 23.8bp
Average Position of motif in Background50.0 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0013.1_Eomes_1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AAATTTCACA-------
NNTTTTCACACCTTNNN
 C T G A G T C A G C T A C A G T A G C T C G A T A G T C G C T A G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

CEBPA/MA0102.3/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AAATTTCACA---
--ATTGCACAATA
 C T G A G T C A G C T A C A G T A G C T C G A T A G T C G C T A G T A C G C T A A C G T A C G T A C G T
A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

TBR1/MA0802.1/Jaspar

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AAATTTCACA---
---TTTCACACCT
 C T G A G T C A G C T A C A G T A G C T C G A T A G T C G C T A G T A C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

EOMES/MA0800.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AAATTTCACA----
-NTTTTCACACCTT
 C T G A G T C A G C T A C A G T A G C T C G A T A G T C G C T A G T A C G C T A A C G T A C G T A C G T A C G T
A C G T C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AAATTTCACA--
--HTTTCCCASG
 C T G A G T C A G C T A C A G T A G C T C G A T A G T C G C T A G T A C G C T A A C G T A C G T
A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AAATTTCACA---
-ACTTTCACTTTC
 C T G A G T C A G C T A C A G T A G C T C G A T A G T C G C T A G T A C G C T A A C G T A C G T A C G T
A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AAATTTCACA----
---TTTCACACCTN
 C T G A G T C A G C T A C A G T A G C T C G A T A G T C G C T A G T A C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AAATTTCACA----
----TTCACACCTT
 C T G A G T C A G C T A C A G T A G C T C G A T A G T C G C T A G T A C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

TBX20/MA0689.1/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AAATTTCACA----
---CTTCACACCTA
 C T G A G T C A G C T A C A G T A G C T C G A T A G T C G C T A G T A C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AAATTTCACA--
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C G T C T G A G T C A G C T A C A G T A G C T C G A T A G T C G C T A G T A C G C T A A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G