Information for 7-AGGGAAGTCC (Motif 6)

T C G A C T A G C T A G C T A G G T C A C T G A T A C G C G A T A G T C A T G C
Reverse Opposite:
A T C G T C A G C G T A A T G C A G C T A C G T A G T C G A T C A G T C A G C T
p-value:1e-10
log p-value:-2.388e+01
Information Content per bp:1.788
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.68%
Number of Background Sequences with motif224.4
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets59.4 +/- 22.0bp
Average Position of motif in Background49.8 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0058.1_Sfpi1_1/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----AGGGAAGTCC
TTAAGAGGAAGTTA
 A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A C T G A T A C G C G A T A G T C A T G C
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGGGAAGTCC---
-GGGAAATCCCCN
 T C G A C T A G C T A G C T A G G T C A C T G A T A C G C G A T A G T C A T G C A C G T A C G T A C G T
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGGGAAGTCC-
-GGAAATTCCC
 T C G A C T A G C T A G C T A G G T C A C T G A T A C G C G A T A G T C A T G C A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AGGGAAGTCC
ACVAGGAAGT--
 A C G T A C G T T C G A C T A G C T A G C T A G G T C A C T G A T A C G C G A T A G T C A T G C
G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AGGGAAGTCC
AAGGCAAGTGT
 A C G T T C G A C T A G C T A G C T A G G T C A C T G A T A C G C G A T A G T C A T G C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AGGGAAGTCC
AVCAGGAAGT--
 A C G T A C G T T C G A C T A G C T A G C T A G G T C A C T G A T A C G C G A T A G T C A T G C
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGGGAAGTCC
AGAGGAAGTG-
 A C G T T C G A C T A G C T A G C T A G G T C A C T G A T A C G C G A T A G T C A T G C
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:8
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AGGGAAGTCC
AAAGRGGAAGTG-
 A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A C T G A T A C G C G A T A G T C A T G C
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AGGGAAGTCC
ANCAGGAAGT--
 A C G T A C G T T C G A C T A G C T A G C T A G G T C A C T G A T A C G C G A T A G T C A T G C
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGGGAAGTCC-
-GGAAATCCCC
 T C G A C T A G C T A G C T A G G T C A C T G A T A C G C G A T A G T C A T G C A C G T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C