Information for 9-TGTGTTAACA (Motif 10)

C G A T A C T G C G A T A T C G A C G T A C G T G T C A G C T A T A G C C G T A
Reverse Opposite:
A C G T A T C G C G A T A C G T C G T A C G T A T A G C C G T A G T A C C G T A
p-value:1e-7
log p-value:-1.834e+01
Information Content per bp:1.843
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif44.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets48.8 +/- 31.2bp
Average Position of motif in Background48.6 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0109.1_Bbx_2/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--TGTGTTAACA-----
TGATTGTTAACAGTTGG
 A C G T A C G T C G A T A C T G C G A T A T C G A C G T A C G T G T C A G C T A T A G C C G T A A C G T A C G T A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGTGTTAACA--
TATGTAAACANG
 C G A T A C T G C G A T A T C G A C G T A C G T G T C A G C T A T A G C C G T A A C G T A C G T
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTTAACA---
NCWRWGTAAACANSV
 A C G T A C G T C G A T A C T G C G A T A T C G A C G T A C G T G T C A G C T A T A G C C G T A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----TGTGTTAACA--
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G A T A T C G A C G T A C G T G T C A G C T A T A G C C G T A A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTTAACA
NCTAAGTAAACA
 A C G T A C G T C G A T A C T G C G A T A T C G A C G T A C G T G T C A G C T A T A G C C G T A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:6
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TGTGTTAACA
--TGTTTACH
 C G A T A C T G C G A T A T C G A C G T A C G T G T C A G C T A T A G C C G T A
A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A

FOXA1/MA0148.3/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTTAACA----
CAAAGTAAACANNNN
 A C G T C G A T A C T G C G A T A T C G A C G T A C G T G T C A G C T A T A G C C G T A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXP2/MA0593.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGTGTTAACA-
TNTGTTTACTT
 C G A T A C T G C G A T A T C G A C G T A C G T G T C A G C T A T A G C C G T A A C G T
G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGTGTTAACA
AAGGTGTKAA--
 A C G T A C G T C G A T A C T G C G A T A T C G A C G T A C G T G T C A G C T A T A G C C G T A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TGTGTTAACA--
NNNNTTTGTTTACNNT
 A C G T A C G T A C G T A C G T C G A T A C T G C G A T A T C G A C G T A C G T G T C A G C T A T A G C C G T A A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T