Information for 7-ACTAAATTGT (Motif 8)

T C G A A T G C A C G T C G T A C G T A C G T A G A C T C G A T C T A G C G A T
Reverse Opposite:
C G T A G A T C C G T A C T G A A C G T G C A T A C G T C G T A T A C G A G C T
p-value:1e-8
log p-value:-1.995e+01
Information Content per bp:1.832
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif90.3
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets52.4 +/- 26.6bp
Average Position of motif in Background52.4 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:ACTAAATTGT------
--AAAATTGTTATGAA
 T C G A A T G C A C G T C G T A C G T A C G T A G A C T C G A T C T A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-ACTAAATTGT------
GGAAAAATTGTTAGGAA
 A C G T T C G A A T G C A C G T C G T A C G T A C G T A G A C T C G A T C T A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ACTAAATTGT-------
AATCAATTGTTCCGCTA
 T C G A A T G C A C G T C G T A C G T A C G T A G A C T C G A T C T A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0066.1_Sox17_1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ACTAAATTGT----
NNATNAATTGTTTNN
 A C G T T C G A A T G C A C G T C G T A C G T A C G T A G A C T C G A T C T A G C G A T A C G T A C G T A C G T A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACTAAATTGT------
AANTTATTGTTCTNNA
 T C G A A T G C A C G T C G T A C G T A C G T A G A C T C G A T C T A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0065.1_Sox15_1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ACTAAATTGT------
ANNTCTATTGTTCNNNA
 A C G T T C G A A T G C A C G T C G T A C G T A C G T A G A C T C G A T C T A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0074.1_Sox8_1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACTAAATTGT------
GTATCTATTGTTCTTTA
 A C G T T C G A A T G C A C G T C G T A C G T A C G T A G A C T C G A T C T A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

PB0067.1_Sox18_1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ACTAAATTGT-------
-TTCAATTGTTCTAAAA
 T C G A A T G C A C G T C G T A C G T A C G T A G A C T C G A T C T A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0072.1_Sox5_1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACTAAATTGT------
NNTTTATTGTTCTNNN
 T C G A A T G C A C G T C G T A C G T A C G T A G A C T C G A T C T A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ACTAAATTGT-
--CTCATTGTC
 T C G A A T G C A C G T C G T A C G T A C G T A G A C T C G A T C T A G C G A T A C G T
A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C