Information for 6-CAWCTTWCAT (Motif 7)

G T A C G T C A C G T A T A G C G C A T A G C T G C T A T G A C G C T A G A C T
Reverse Opposite:
C T G A C G A T A C T G C G A T T C G A C G T A A T C G G C A T C A G T C A T G
p-value:1e-9
log p-value:-2.105e+01
Information Content per bp:1.485
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif99.0
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets54.4 +/- 25.0bp
Average Position of motif in Background49.1 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myb/MA0100.2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAWCTTWCAT
CCAACTGCCA-
 A C G T G T A C G T C A C G T A T A G C G C A T A G C T G C T A T G A C G C T A G A C T
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CAWCTTWCAT
GKVTCADRTTWC--
 A C G T A C G T A C G T A C G T G T A C G T C A C G T A T A G C G C A T A G C T G C T A T G A C G C T A G A C T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAWCTTWCAT--
-ANGTTACATAA
 G T A C G T C A C G T A T A G C G C A T A G C T G C T A T G A C G C T A G A C T A C G T A C G T
A C G T C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CAWCTTWCAT
GKMTCADRTTWC--
 A C G T A C G T A C G T A C G T G T A C G T C A C G T A T A G C G C A T A G C T G C T A T G A C G C T A G A C T
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAWCTTWCAT-
NNACTTACCTN
 G T A C G T C A C G T A T A G C G C A T A G C T G C T A T G A C G C T A G A C T A C G T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAWCTTWCAT
-ARNTGACA-
 G T A C G T C A C G T A T A G C G C A T A G C T G C T A T G A C G C T A G A C T
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAWCTTWCAT-----
GACCACATTCATACAAT
 A C G T A C G T G T A C G T C A C G T A T A G C G C A T A G C T G C T A T G A C G C T A G A C T A C G T A C G T A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAWCTTWCAT-
-VGCTGWCAVB
 G T A C G T C A C G T A T A G C G C A T A G C T G C T A T G A C G C T A G A C T A C G T
A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CAWCTTWCAT----
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T G T A C G T C A C G T A T A G C G C A T A G C T G C T A T G A C G C T A G A C T A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAWCTTWCAT----
--ACTTTCACTTTC
 G T A C G T C A C G T A T A G C G C A T A G C T G C T A T G A C G C T A G A C T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C