Information for 10-AGATCCTGGCCCC (Motif 10)

C G T A A C T G C G T A A G C T A G T C A G T C A C G T A C T G A C T G A T G C A G T C A G T C G T A C
Reverse Opposite:
A C T G A C T G A C T G A T C G A G T C G T A C C G T A A C T G C T A G C T G A A C G T A G T C A C G T
p-value:1e-8
log p-value:-1.941e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 11.5bp
Average Position of motif in Background41.7 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGATCCTGGCCCC
ACATCCTGNT---
 C G T A A C T G C G T A A G C T A G T C A G T C A C G T A C T G A C T G A T G C A G T C A G T C G T A C
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGATCCTGGCCCC
AAGATATCCTT-----
 A C G T A C G T A C G T C G T A A C T G C G T A A G C T A G T C A G T C A C G T A C T G A C T G A T G C A G T C A G T C G T A C
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:3
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AGATCCTGGCCCC
GATAACATCCTAGTAG-
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G C T A G T C A G T C A C G T A C T G A C T G A T G C A G T C A G T C G T A C
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGATCCTGGCCCC---
GAGCCCTTGTCCCTAA
 C G T A A C T G C G T A A G C T A G T C A G T C A C G T A C T G A C T G A T G C A G T C A G T C G T A C A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGATCCTGGCCCC
-GRTGMTRGAGCC
 C G T A A C T G C G T A A G C T A G T C A G T C A C G T A C T G A C T G A T G C A G T C A G T C G T A C
A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AGATCCTGGCCCC
NNAYTTCCTGHN---
 A C G T A C G T C G T A A C T G C G T A A G C T A G T C A G T C A C G T A C T G A C T G A T G C A G T C A G T C G T A C
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AGATCCTGGCCCC-----
-NNNNTTGACCCCTNNNN
 C G T A A C T G C G T A A G C T A G T C A G T C A C G T A C T G A C T G A T G C A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

SPDEF/MA0686.1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGATCCTGGCCCC
TACATCCGGGT---
 A C G T C G T A A C T G C G T A A G C T A G T C A G T C A C G T A C T G A C T G A T G C A G T C A G T C G T A C
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGATCCTGGCCCC-
TGACCTTTGCCCCA
 C G T A A C T G C G T A A G C T A G T C A G T C A C G T A C T G A C T G A T G C A G T C A G T C G T A C A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AGATCCTGGCCCC
ATAATCCC------
 A C G T C G T A A C T G C G T A A G C T A G T C A G T C A C G T A C T G A C T G A T G C A G T C A G T C G T A C
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T