Information for 10-CAGWATCACAAGG (Motif 9)

A G T C C G T A A C T G C G A T G T C A C G A T G T A C C G T A A G T C C G T A G T C A A C T G A C T G
Reverse Opposite:
G T A C A G T C A C G T A C G T C T A G A C G T A C T G C G T A A C G T C G A T A G T C A C G T A C T G
p-value:1e-10
log p-value:-2.400e+01
Information Content per bp:1.834
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.5 +/- 19.6bp
Average Position of motif in Background27.1 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLTF/MA0109.1/Jaspar

Match Rank:1
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CAGWATCACAAGG--
-----NNATAAGGNN
 A G T C C G T A A C T G C G A T G T C A C G A T G T A C C G T A A G T C C G T A G T C A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CAGWATCACAAGG
-------ACAAAG
 A G T C C G T A A C T G C G A T G T C A C G A T G T A C C G T A A G T C C G T A G T C A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

PB0119.1_Foxa2_2/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAGWATCACAAGG--
AAAAATAACAAACGG
 A G T C C G T A A C T G C G A T G T C A C G A T G T A C C G T A A G T C C G T A G T C A A C T G A C T G A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAGWATCACAAGG
ATTTACAGTAGCAAAA--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G A T G T C A C G A T G T A C C G T A A G T C C G T A G T C A A C T G A C T G
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CAGWATCACAAGG-
----GTCACATGAY
 A G T C C G T A A C T G C G A T G T C A C G A T G T A C C G T A A G T C C G T A G T C A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

Mitf/MA0620.1/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CAGWATCACAAGG
---GGTCACGTGG
 A G T C C G T A A C T G C G A T G T C A C G A T G T A C C G T A A G T C C G T A G T C A A C T G A C T G
A C G T A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

POL002.1_INR/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CAGWATCACAAGG
TCAGTCTT------
 A C G T A G T C C G T A A C T G C G A T G T C A C G A T G T A C C G T A A G T C C G T A G T C A A C T G A C T G
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CAGWATCACAAGG-
----VRRACAAWGG
 A G T C C G T A A C T G C G A T G T C A C G A T G T A C C G T A A G T C C G T A G T C A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.50
Offset:8
Orientation:forward strand
Alignment:CAGWATCACAAGG-----
--------CAAGGHCANV
 A G T C C G T A A C T G C G A T G T C A C G A T G T A C C G T A A G T C C G T A G T C A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CAGWATCACAAGG
-AGAAACGAAAGT
 A G T C C G T A A C T G C G A T G T C A C G A T G T A C C G T A A G T C C G T A G T C A A C T G A C T G
A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T