Information for 7-AGAACTCAACCAA (Motif 5)

C G T A A C T G C G T A C G T A A G T C A C G T G A T C C G T A C G T A G T A C G T A C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C T G A C G T A C G T C T A G C G T A C T A G A C G T A C G T A G T C A C G T
p-value:1e-11
log p-value:-2.642e+01
Information Content per bp:1.932
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.3 +/- 20.3bp
Average Position of motif in Background60.7 +/- 9.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0026.1_Duxbl/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGAACTCAACCAA-----
-CGACCCAATCAACGGTG
 C G T A A C T G C G T A C G T A A G T C A C G T G A T C C G T A C G T A G T A C G T A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGAACTCAACCAA-
NWTAAYCYAATCAWN
 A C G T C G T A A C T G C G T A C G T A A G T C A C G T G A T C C G T A C G T A G T A C G T A C C G T A C G T A A C G T
C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGAACTCAACCAA
AAGCACTTAA----
 A C G T C G T A A C T G C G T A C G T A A G T C A C G T G A T C C G T A C G T A G T A C G T A C C G T A C G T A
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGAACTCAACCAA
AAAAGTCAA----
 C G T A A C T G C G T A C G T A A G T C A C G T G A T C C G T A C G T A G T A C G T A C C G T A C G T A
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T

DUX4/MA0468.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGAACTCAACCAA
-TAATTTAATCA-
 C G T A A C T G C G T A C G T A A G T C A C G T G A T C C G T A C G T A G T A C G T A C C G T A C G T A
A C G T G C A T C T G A C G T A G A C T A G C T A G C T G T C A C G T A A C G T A G T C C G T A A C G T

PH0037.1_Hdx/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AGAACTCAACCAA
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C A C G T G A T C C G T A C G T A G T A C G T A C C G T A C G T A
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

DUXA/MA0884.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGAACTCAACCAA
CTAATTTAATCAA
 C G T A A C T G C G T A C G T A A G T C A C G T G A T C C G T A C G T A G T A C G T A C C G T A C G T A
G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A

Vdr/MA0693.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGAACTCAACCAA---
TGAACTCNATGAACTC
 C G T A A C T G C G T A C G T A A G T C A C G T G A T C C G T A C G T A G T A C G T A C C G T A C G T A A C G T A C G T A C G T
G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:9
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------AGAACTCAACCAA
TATCATTAGAACGCT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C A C G T G A T C C G T A C G T A G T A C G T A C C G T A C G T A
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGAACTCAACCAA-
--CCATCAATCAAA
 C G T A A C T G C G T A C G T A A G T C A C G T G A T C C G T A C G T A G T A C G T A C C G T A C G T A A C G T
A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A